Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq142507 149 8e-31 >seq142507 Length=2538 Score = 149 bits (164), Expect = 8e-31 Identities = 259/377 (69%), Gaps = 0/377 (0%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| |||||||| |||||||| | || || || | || | |||||| || | Sbjct 2167 CCAGTGGCTATAACAAAGTCATCAGGCACCTCATGCTGTAAGATCATCCACATGGCTCTG 2108 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || || || |||| |||||||| || | | |||||||| || || | | | Sbjct 2107 ACGTAGTCCTTGGCGTGTCCCCAATCTCTGTTAGAGTCAAGATTCCCAAGGACAATATCG 2048 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967 ||||||| || | | | ||| | |||| || ||||| | |||||||| ||| Sbjct 2047 TCTTGCTGTCCGTGAAATATTTTGGCAACACCTCTGGTTATCTTCCTCGTTACAAATGTT 1988 Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027 || || | ||||||| || || || || || || ||| | |||||| | || ||| Sbjct 1987 TCTCCCCTTCTTGGACTCTCGTGGTTGAACAGGATCCCATTGCAGGCAAATATATTGTAG 1928 Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAA 48087 | || | ||||| ||||||||||| |||| | || || | ||||| || || Sbjct 1927 GCCTCTCTGTAGTTGACCACTATCCAGTATGCATATACCTTCGCTGCTCCATAGGGGGAT 1868 Query 48088 CGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCA 48147 | |||||||| ||||||||||| |||||||| |||| |||||| ||||| | ||| Sbjct 1867 CTCGGATAGAATGGTGTGGTCTCCTTCTGTGGAATCTCCTGCACCAGCCCATACATTTCG 1808 Query 48148 CTGGTGGATGCTTGATA 48164 || || ||||| ||||| Sbjct 1807 CTTGTCGATGCCTGATA 1791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663727795203120