Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq195337 87.8 2e-12 seq88155 87.8 2e-12 seq118491 84.2 3e-11 >seq195337 Length=3657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 || ||| | ||||| || | | ||||||||||| |||| || || ||||| |||||| Sbjct 2876 GTCTGGTACGCTATCATCGAGGCTCAGACGGAGACCGGAAACCCCTACATGCTGTACAAG 2817 Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994 ||||| || ||||||||| ||||| | || |||| || |||||| | || || Sbjct 2816 GATGCGTGCAACAAGAAGTCCAACCAGCAAAACCTGGGGACCATCAAGTGTAGCAACCTC 2757 Query 75995 TGCACGGAAATTTTAGAGTACAC 76017 ||||| || ||| | |||||||| Sbjct 2756 TGCACCGAGATTGTGGAGTACAC 2734 >seq88155 Length=6096 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 || ||| | ||||| || | | ||||| ||||| |||| || || ||||| |||||| Sbjct 1321 GTCTGGTACGCTATCATCGAGGCCCAGACAGAGACGGGAAACCCCTACATGCTGTACAAG 1380 Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994 ||||| || ||||||||| ||||| |||| |||| || |||||| | || || Sbjct 1381 GATGCGTGCAACAAGAAGTCGAACCAGCAGAACCTGGGGACCATCAAGTGTAGTAACCTC 1440 Query 75995 TGCACGGAAATTTTAGAGTACAC 76017 ||||| || ||| | |||||||| Sbjct 1441 TGCACAGAGATTGTCGAGTACAC 1463 >seq118491 Length=654 Score = 84.2 bits (92), Expect = 3e-11 Identities = 221/330 (67%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAACGGCTCGATGGCATCCTCA 75203 |||||||| |||||||||| |||| | || || |||| | ||||| | | Sbjct 409 TACTTTGGCATCAAAACCCTAGAGAGGTCGTACCTACTCAAAA--TAGATGGGAAAGTAG 352 Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263 | || |||||| ||||||| ||| |||| || |||| || ||| ||||| | | Sbjct 351 TTGAGCGCCCACAACACATGTTGATGAGGGTAGCCCTCGGAATTCACTTTGAAGATTTAG 292 Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCA 75322 | | | | || || ||| || ||||| | | ||| || || || || ||||| Sbjct 291 ACGCCGCTATTGAAACCTACAACCTTATGTCGGA-GAAATGGTTTATACATGCCACACCG 233 Query 75323 ACCCTCTTCAATGCTGGTA-CACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381 |||||||| |||||||||| || |||| | || | | || || ||| | | | | Sbjct 232 ACCCTCTTTAATGCTGGTACCAACAAG-GCTCAACTTGCGAGCTGTTTCTTGCTGACTAT 174 Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 || |||||| || ||||||| | || ||| || | ||||||| | |||||| || Sbjct 173 GAAAGAGGACAGTATGGACGGTATATTTGAAACGCTGAAACAGTGTGCACTAATCTCCAA 114 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCA 75471 || |||||||| || ||| | ||||||| Sbjct 113 GTCCGCTGGGGGGATCGGGGTCAACATCCA 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594985961254080