Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq121234 152 7e-32 seq114 149 8e-31 seq90790 125 9e-24 seq95602 91.5 2e-13 seq208059 84.2 3e-11 seq53644 84.2 3e-11 >seq121234 Length=1358 Score = 152 bits (168), Expect = 7e-32 Identities = 696/1083 (64%), Gaps = 23/1083 (2%) Strand=Plus/Plus Query 195805 CAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAA 195864 ||| || || ||||| ||||| | || || || |||||||||||| | || || | Sbjct 1 CAACGAGCCGACAGCTGCTGCGCTCGCCTACGGACTGGACAAGAACCTGAGCGGGGAGAG 60 Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 ||| || |||||| || | || || || ||||| || ||||| | || | || || Sbjct 61 AAACGTGCTGATCTACGACTTGGGCGGAGGGACGTTCGACGTCTCCATCCTGACCATCGA 120 Query 195925 AG-GTGGTA--TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGA 195981 | | || | | || ||||| || || || || || || ||||| || || ||||| Sbjct 121 CGAGGGGCAGCTGTTTGAAGTGCGCGCCACGGCCGGCGACACCCATCTCGGCGGGGAAGA 180 Query 195982 TTTCGATG-CAC-GTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAA 196039 ||||| || ||| || | | || || || || || || ||| | ||||| Sbjct 181 CTTCGACAACAGAGTCGTCAACCAC-TTCATC-GAGGAATTTAAGCGGAAGTACAAGAAG 238 Query 196040 GATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 || | || || |||| | |||||||| || || || |||||||| ||||| Sbjct 239 GACTTGCGCTCCAACCCCCGGGCCATCCGTCGGCTGAGAACGGCGTGTGAACGGGCCAAG 298 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 |||| || || || | | | || | ||||| || || | || || || Sbjct 299 AGAACGCTGTCGTCCAGCACGGAGGCAGCCTTAGAGATCGACTCTCTACACGAGGGGATC 358 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 |||||||| | | | || || || | ||||| ||| | |||||| |||| | Sbjct 359 GACTTCTACTCCAAGCTGACGCGGGCCAGGTTTGAGGAGCTGTGTTCTGATCTGTTCCGC 418 Query 196220 AAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAG 196276 ||| |||| || || || | | || || ||||| |||||||| ||||||||| Sbjct 419 G---GTACGCTGGAGCCCGTGGAGAAGGCCCTCCGCGACGCCAAGATGGACAAGTCTAAG 475 Query 196277 GTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTT 196336 | | ||| | || | || ||||| |||||||||||||| |||| || | | | | | Sbjct 476 ATCCACGAAGTCGTGTTGGTTGGAGGGTCAACCCGTATTCCCAAGA-TCCAGAAACTCCT 534 Query 196337 TCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGC 196395 || || ||||||||| ||||| | |||||| | |||||||| || || || || || Sbjct 535 TCAAGACTTCTTCAACGGCAAAGAACTGAACAAATCCATCAACCCTGACGAGGCTGTGGC 594 Query 196396 TTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGA 196455 ||| ||||| || || |||||||| || || || || || || | | | | || Sbjct 595 TTACGGTGCCGCTGTGCAGGCTGCCATCCTGTCTGGCGTGGAGGACGAGGGAATTAAGGA 654 Query 196456 TCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTAT 196515 | || || | || || || || | || |||| | || || || || || || || Sbjct 655 CGTCCTTCTCGTAGACGTCGCGCCTCTTTCGTTGGGCATCGAGACGGCAGGCGGCGTCAT 714 Query 196516 GACTAAAATTATTGATAGGAACACAACTATTCCGACTA-AGAAGGAACAAGTC-TTTTCA 196573 ||| || | | || | ||||| || || ||| | || | || | || | Sbjct 715 GACCAAGCTGGTGGAGCGCAACACCCGCATCCC--CTACAAAACCTGCCAGACGTTCACC 772 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || || ||| || || ||||| || || || || || || || || ||| || Sbjct 773 ACCTACAGCGACAACCAGCCAGGAGTCACCATCCAGGTGTACGAGGGCGAGCGCGCCATG 832 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAG-CTGCACCCAG 196692 | || || ||| | | ||| || ||||| ||| | || |||| | | || || | Sbjct 833 ACCAAAGACAACAACCGACTGGGTTTGTTCGAACTGA-GCGGCTTCCCGCCGGCGCCTCG 891 Query 196693 AGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCAC 196752 || || |||||| || | |||| |||||| || ||||| || ||||| || | || | Sbjct 892 CGGCGTGCCACAGGTTGAGGTTTCCTTCGACATCGACGCCAACGGAATCCTGCAGGTGTC 951 Query 196753 AGCTGAGGACAAG-GCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGC 196811 |||| || ||| || ||| | | | || || || ||||| |||||| | | Sbjct 952 CGCTGTAGAGAAGAGCACGGGGCGCAGC-AACAAAATCACCATCACCAACGACAAGAGTC 1010 Query 196812 GGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAG 196871 |||| |||||||| || || || || ||||| || ||||| | | ||| |||| | | Sbjct 1011 GGCTGTCTAAGGAAGACATCGACCGCATGGTGGCTGACGCGGAGAGGCACAAGGAACAGG 1070 Query 196872 ACG 196874 ||| Sbjct 1071 ACG 1073 >seq114 Length=3964 Score = 149 bits (164), Expect = 8e-31 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||| ||||| || || || || |||||||||||||| ||| |||| Sbjct 2896 ATGCAGATTTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTCGAGCCGTCC 2955 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || || ||||| || || ||||| ||||| || || || ||| Sbjct 2956 GACACTATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 3015 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || || || || ||||| || ||||| || ||||| |||| |||||| Sbjct 3016 CAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCTGACTACAAC 3075 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 3076 ATCCAGAAGG 3085 >seq90790 Length=3890 Score = 125 bits (138), Expect = 9e-24 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| || || || || |||||||| ||||| ||| | ||| Sbjct 1167 ATGCAGATCTTTGTGAAAACCCTGACCGGGAAGACCATCACCCTTGAGGTCGAGCCTTCA 1108 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 1107 GACACCATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAG 1048 Query 171982 CA 171983 || Sbjct 1047 CA 1046 >seq95602 Length=1545 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||||||||||||||| ||||| || || |||||||| ||||||||| | ||| Sbjct 82 ATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCTCA 23 Query 171922 GACACAATCGATAACATCAA 171941 ||||| || || || |||| Sbjct 22 GACACCATTGAGAATGTCAA 3 >seq208059 Length=6664 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707 |||||||| | ||||||||||| ||||| || | | | |||| || || || | Sbjct 2265 CTATGGTGCTCGGAAAGATGAAGGAAACTGCCGAGGCCTACTTGGGGAAGACAGTCACCC 2324 Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 | || |||||||| |||||||| ||||||| ||| | || || ||||| || ||||| | Sbjct 2325 ACGCCGTTGTGACCGTACCTGCGTACTTCAACGATGCCCAGCGCCAGGCTACCAAGGATG 2384 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACC 195813 | | | || || || || ||| | | || || ||||| ||||| Sbjct 2385 CGGGCACCATCGCTGGCCTGAACGTTATGAGGATCATCAACGAACC 2430 >seq53644 Length=3628 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 195699 CTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGA 195758 |||||| |||| || || || || || || ||||||| ||||| || || || || | Sbjct 3335 CTGTGACCAATGCTGTGGTTACCGTTCCGGCCTACTTCAACGATTCCCAGCGCCAAGCCA 3276 Query 195759 CAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAG 195818 | ||||| || | | |||| | || || ||| || |||| ||||| |||||||| | Sbjct 3275 CGAAGGATGCCGGTACTATCTCAGGCCTCAACGTCCTCCGAATCATCAACGAACCAACCG 3216 Query 195819 CGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 | || || || || || || ||||||||||| Sbjct 3215 CCGCCGCCATCGCGTACGGACTGGACAAGAA 3185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656116054919520