Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq88155 93.3 1e-13 seq195337 89.7 2e-12 >seq88155 Length=6096 Score = 93.3 bits (102), Expect = 1e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || |||||||| ||| |||||| || ||||||||| || | |||| ||||| Sbjct 1462 TGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCCCAGGTTCTGCTGGT 1403 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || |||| || ||||||||||| || ||||| ||| |||| ||||| |||| | Sbjct 1402 TCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCCGTCTCTGTCTGGG 1343 Query 155749 CGTC 155752 | || Sbjct 1342 CCTC 1339 >seq195337 Length=3657 Score = 89.7 bits (98), Expect = 2e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || |||||||| ||| ||||| || ||||||||| || | || | ||||| Sbjct 2735 TGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCCCAGGTTTTGCTGGT 2794 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || |||| || ||||||||||| || ||||| ||| |||| |||||| |||| | Sbjct 2795 TGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGGGTTTCCGGTCTCCGTCTGAG 2854 Query 155749 CGTC 155752 | || Sbjct 2855 CCTC 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467812873539342