Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq211071 178 2e-38 seq184351 118 1e-20 seq183216 107 2e-17 seq12121 107 2e-17 seq142262 98.7 1e-14 seq150367 95.1 1e-13 seq70572 89.7 6e-12 >seq211071 Length=1307 Score = 178 bits (196), Expect = 2e-38 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||||||||||||||| || ||| || Sbjct 648 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCGGCTGCTGA 707 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| |||| || |||| | Sbjct 708 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAAGCCTCGCCAGCGATCCGCTCGAAGA 767 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||| || |||||||| Sbjct 768 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGCTGGAGACACCGGTGTCGGGGT 827 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||||||||| Sbjct 828 GCACCTGCTTCAGCACCTTGTAGATG 853 >seq184351 Length=2863 Score = 118 bits (130), Expect = 1e-20 Identities = 191/270 (71%), Gaps = 5/270 (2%) Strand=Plus/Plus Query 869183 TCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTG 869242 ||||| || ||||||| ||||| || | |||||||| | || |||||||| || Sbjct 2156 TCGTCTCGGCTGATCAGCTCGTTAGAGAACGTCAGGCCGGGGAGCAGCCCGCGCTTTTTC 2215 Query 869243 AGCCAAAAGATGGCGCAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCC 869301 ||||| |||||||| | |||| |||||||||||| | |||||| || || || ||| | Sbjct 2216 AGCCAGAAGATGGC-CGCAAACGAGCCCGAGAAAAACACGCCCTCCACCGCAGCGAAGGC 2274 Query 869302 GATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTC 869361 | ||||||||| | || |||| | || | | || |||||||| || ||||||||| Sbjct 2275 CACAAGCCGCTCGCCGAA--CGTCGTGTCCTTGC-TGGCGATCCACTGCAGCGCCCAGTC 2331 Query 869362 GGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCGGC 869421 ||||| || ||| |||||| || || | |||| | || || | ||||| Sbjct 2332 CGCCTTGCGCCGCACGCACGGCATGGTCTCCACGGCGTGGAACAGCATCTGTCGCTCGGC 2391 Query 869422 CGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 |||||| || ||| |||| ||||| || Sbjct 2392 CGGGTCGCGGATGTAGCTGTCAATCAGCAG 2421 Score = 86.0 bits (94), Expect = 8e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 868717 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG 868776 |||||| ||||| | |||||||| |||||||| |||||| | ||| ||||| Sbjct 1929 CTCGAAGAAGTTTGCCTTGCCCTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTTTC 1988 Query 868777 CGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 | || || ||| ||||| ||| || ||||| ||||| || || |||||||| Sbjct 1989 CACGTTATAAACCTTCGGGCATCGCAGCTCGGCCAGCAGCCGGTCCGCCACGAACTCGAT 2048 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCG 868886 |||| ||||||| || |||||||||||| | || |||||||||| Sbjct 2049 GTACGCCTTCATGAGGTCGCAGTTCATGCCGATCATGGCGACCGGCAGCG 2098 >seq183216 Length=1015 Score = 107 bits (118), Expect = 2e-17 Identities = 95/117 (81%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCA 1592243 || || |||||||| |||||||| ||||| || || | |||||| |||| || | Sbjct 290 GCTGCTAACTACCTAGACATCAAAGGCCTC--CTAGACGTGACCTGCAAGACTGTAGCAA 347 Query 1592244 ACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| |||| |||||||||||||| ||||| ||||||||| ||| Sbjct 348 ACATGATCAAGGGCAAGACGCCGGAGGAGATCCGCAAAACCTTCAACATCAAGAACG 404 >seq12121 Length=2376 Score = 107 bits (118), Expect = 2e-17 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||||||||||||||| || ||| || Sbjct 1440 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCGGCTGCTGA 1381 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| ||| ||| | ||||||||||| | || | |||| || Sbjct 1380 TAGTGGAGCGCTTGTTGTAGTTCGCTAAGCGGCCGGCCTCACCAGCAATCCTCTCGAACA 1321 Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486 ||||| || ||||||||||||| Sbjct 1320 GATCGTTAACGAACGAGTTCATGA 1297 >seq142262 Length=5470 Score = 98.7 bits (108), Expect = 1e-14 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 869715 CCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAA 869774 ||||||||||| ||||||||||||||||| ||||| ||||| || |||||| ||| | Sbjct 2 CCAGGTTCTCGTTGACGATGCCGTCGCTGGCCGCGAAGAAAGCGAGAACGTGCGAGATGA 61 Query 869775 AGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCGGCGCTGAGGTCCACCT 869834 | | |||||| | | || |||| ||||| | || || | || ||||||| Sbjct 62 ACCGCCGCTCGGCCGGCTTCAGTGACAACCAGTCCGCCGTATCCTTCCCAAGATCCACCT 121 Query 869835 CCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGGTAGC 869894 | || || ||||| ||||| | ||||| |||||||| |||| | | ||||| | Sbjct 122 CTTCTGCACACCAGAAGGAGGCTTGCGCCTTCTTGTACATGCCCCACATGTCGTGGTACC 181 Query 869895 GGATAGGGAAGAGGACAAA 869913 |||| || || | ||||| Sbjct 182 GGATGGGAAACACTACAAA 200 >seq150367 Length=3699 Score = 95.1 bits (104), Expect = 1e-13 Identities = 176/258 (68%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| || || || ||||| || |||||||| || ||| ||| |||| | ||| | | Sbjct 2134 GAGTGAATATTTTCCATGGCAATTTGGAAGCCCTAGAAGCACCTGGCCTCGGTCACCTTG 2193 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATG-----CCGTCGCTGGCGG 869747 ||||| | |||| | | |||| ||||| ||| || || ||||| || | Sbjct 2194 ACCTCTTGGCTGAATCTCTCCACCAGATTCTCATTGACGTTGGTTGTCCATCGCTAGCCG 2253 Query 869748 CGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGT 869807 | || || ||||||||||| ||||| ||||| | | ||| || || ||| | |||||| Sbjct 2254 CAAAGAATGCCAGGACGTGTTTGATGAAGTGTCTTTTGTCATCACTCAGCTTCTCCCAGT 2313 Query 869808 GGACGGTGTCGGCGCT---GAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864 | | ||| | | |||||| || ||||| | ||||||| || |||| || | Sbjct 2314 AGGCCAAGTCCTCTTTCGAGAGGTCTACTTCCTCAACTGTCCAGAATGATGCCTAGGTTT 2373 Query 869865 TTTTGTACATCTCCCATA 869882 | || |||||| ||||| Sbjct 2374 TCTTCTACATCCGCCATA 2391 >seq70572 Length=11765 Score = 89.7 bits (98), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 733188 CCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTC 733247 ||||||||| | ||||||||||||||||||||||| || |||||||| || | || || Sbjct 4107 CCCGACATCATCATCAACCCGCACGCCATCCCGTCCCGTATGACCATCGGTCACTTGATC 4166 Query 733248 GAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTT 733306 ||| || | ||| |||||| | | ||||| | ||||| |||| ||||||||| Sbjct 4167 GAGTGTCTGCAGGGGAAGGTGTCGGCTAACAAGGGCGAGATCGGTGACGCCACGCCCTT 4225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6089711451530022