Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq114 100 3e-16 >seq114 Length=3964 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || |||||||| || || || ||||| || || | || Sbjct 2896 ATGCAGATTTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTCGAGCCGTCC 2955 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2956 GACACTATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 3015 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || |||||||||||| | | | |||| || || ||| Sbjct 3016 CAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCTGACTACAAC 3075 Query 24884 ATTCAAAAGG 24893 || || |||| Sbjct 3076 ATCCAGAAGG 3085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448703313078480