Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq211071 223 5e-52 seq12121 161 2e-33 seq184351 149 1e-29 seq142262 107 3e-17 seq183216 104 4e-16 >seq211071 Length=1307 Score = 223 bits (246), Expect = 5e-52 Identities = 194/241 (80%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||| ||||||| ||||| ||| Sbjct 609 TGTACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAGCTCGCCAGGCA 668 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||||||||||||||| ||| ||| ||| ||| ||||||||| | Sbjct 669 GCAGCAGGCGCACGGCGGTCTGGATCTCCCGGCTGCTGATGGTGGAGCGCTTGTTGTAGT 728 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||| |||| || |||| ||||||||||| || ||||||| Sbjct 729 GCGCCAGGCGGGAAGCCTCGCCAGCGATCCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 788 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || |||||||||||||||||| |||||||||| Sbjct 789 TGATGCCCATGGCCTTGCTGGAGACACCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 848 Query 1485710 A 1485710 | Sbjct 849 A 849 >seq12121 Length=2376 Score = 161 bits (178), Expect = 2e-33 Identities = 146/184 (79%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||| ||||||| ||||| ||| Sbjct 1479 TGTACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAGCTCGCCAGGCA 1420 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||||||||||||||| ||| ||| ||| ||| ||||||||| | Sbjct 1419 GCAGCAGGCGCACGGCGGTCTGGATCTCCCGGCTGCTGATAGTGGAGCGCTTGTTGTAGT 1360 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| | |||||||||||| | || | |||| || ||||| || |||||||||| Sbjct 1359 TCGCTAAGCGGCCGGCCTCACCAGCAATCCTCTCGAACAGATCGTTAACGAACGAGTTCA 1300 Query 1485650 TGAT 1485653 |||| Sbjct 1299 TGAT 1296 >seq184351 Length=2863 Score = 149 bits (164), Expect = 1e-29 Identities = 230/325 (71%), Gaps = 5/325 (2%) Strand=Plus/Plus Query 794344 TCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTG 794403 ||||| || ||||||| ||||| || |||||||| | || |||||||| || Sbjct 2156 TCGTCTCGGCTGATCAGCTCGTTAGAGAACGTCAGGCCGGGGAGCAGCCCGCGCTTTTTC 2215 Query 794404 AGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCC 794462 ||||| |||||||| | |||| |||||||||||| | |||||| || || || ||| | Sbjct 2216 AGCCAGAAGATGGC-CGCAAACGAGCCCGAGAAAAACACGCCCTCCACCGCAGCGAAGGC 2274 Query 794463 GACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTC 794522 || ||||||||| | || || | | ||| || |||||||| || |||||| || Sbjct 2275 CACAAGCCGCTCGCCGAACGT---CGTGTCCTTGCTGGCGATCCACTGCAGCGCCCAGTC 2331 Query 794523 TGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGAC 794582 ||||| || ||| | |||| || || | |||| | || || | |||| | Sbjct 2332 CGCCTTGCGCCGCACGCACGGCATGGTCTCCACGGCGTGGAACAGCATCTGTCGCTCGGC 2391 Query 794583 CGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGAT 794642 |||||| || |||| |||| || || || ||| |||| ||||| | |||||| || Sbjct 2392 CGGGTCGCGGATGTAGCTGTCAATCAGCAGGCTGTACATCTCCGAGTGCACGTTTTCCAT 2451 Query 794643 GGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||| ||||| || ||| Sbjct 2452 GGCGATCTGGAAACCATAGAAACAG 2476 >seq142262 Length=5470 Score = 107 bits (118), Expect = 3e-17 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 796187 CCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAA 796246 |||||||||| ||||||||||||||||| ||||| || ||||| |||||| ||| | Sbjct 2 CCAGGTTCTCGTTGACGATGCCGTCGCTGGCCGCGAAGAAAGCGAGAACGTGCGAGATGA 61 Query 796247 AGTGACGCTCGTCGTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCT 796306 | | |||||| | | || || | ||||| |||| || || || || |||| Sbjct 62 ACCGCCGCTCGGCCGGCTTCAGTGACAACCAGTCCGCCGTATCCTTCCCAAGATCCACCT 121 Query 796307 CCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGC 796366 | || || ||| |||||||| | ||||| |||||||| |||| || ||||| | Sbjct 122 CTTCTGCACACCAGAAGGAGGCTTGCGCCTTCTTGTACATGCCCCACATGTCGTGGTACC 181 Query 796367 GGATGGGGAACAGAACAAA 796385 ||||||| |||| ||||| Sbjct 182 GGATGGGAAACACTACAAA 200 >seq183216 Length=1015 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || |||||||| |||||||| |||||| || || |||||||| || || ||| Sbjct 290 GCTGCTAACTACCTAGACATCAAAGGCCTCCTAGACGTGACCTGCAAGACTGTAGCAAAC 349 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||| |||| ||||| |||||||| ||||| ||||||||| ||| Sbjct 350 ATGATCAAGGGCAAGACGCCGGAGGAGATCCGCAAAACCTTCAACATCAAGAACG 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7893656059978674