Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq114 125 5e-24 >seq114 Length=3964 Score = 125 bits (138), Expect = 5e-24 Identities = 144/192 (75%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| |||| ||||| ||||| |||||||||| Sbjct 3085 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGA 3026 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || ||||||||| |||| | ||||||||||| | || || || || || Sbjct 3025 TAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC--ATT 2968 Query 34908 CT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 || || | || | |||||| || | ||| |||||||| || || |||||||| || Sbjct 2967 CTCGATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 2908 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 2907 AAAAATCTGCAT 2896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324849838434554