Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq6328 95.1 2e-14 seq148679 93.3 5e-14 seq25179 93.3 5e-14 seq192152 89.7 7e-13 seq147940 89.7 7e-13 seq142975 89.7 7e-13 seq82192 89.7 7e-13 seq39877 89.7 7e-13 seq35616 89.7 7e-13 seq186939 84.2 3e-11 >seq6328 Length=781 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11723 AACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGT 11781 || ||||||| |||||||||||||| ||||| |||| ||||| | |||||||||||||| Sbjct 487 AAGCCAGTCCGTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGT 428 Query 11782 TCGATTCCCCGACGAGGAG 11800 ||||||||||||| |||| Sbjct 427 TCGATTCCCCGACACGGAG 409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 475 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 416 Query 8723 CGAGGAG 8729 | |||| Sbjct 415 CACGGAG 409 >seq148679 Length=1809 Score = 93.3 bits (102), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 437 AGTCCGTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 496 Query 11787 TCCCCGACGAGGAGGG 11802 |||||||| |||||| Sbjct 497 TCCCCGACACGGAGGG 512 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 444 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 503 Query 8723 CGAGGAG 8729 | |||| Sbjct 504 CACGGAG 510 >seq25179 Length=2471 Score = 93.3 bits (102), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 707 AGTCCGTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 766 Query 11787 TCCCCGACGAGGAGGG 11802 |||||||| |||||| Sbjct 767 TCCCCGACACGGAGGG 782 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 714 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 773 Query 8723 CGAGGAG 8729 | |||| Sbjct 774 CACGGAG 780 >seq192152 Length=1635 Score = 89.7 bits (98), Expect = 7e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 ||||| |||||||||||||| ||||| |||| ||||| | |||| |||||||||||||| Sbjct 82 ATTCCGTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGCGACCGGGGTTCGAT 141 Query 8716 TCCCCGACGAGGAG 8729 |||||||| |||| Sbjct 142 TCCCCGACACGGAG 155 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 562 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 621 Query 8723 CGAGGAG 8729 | |||| Sbjct 622 CACGGAG 628 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||| ||||||||||||||||||||| Sbjct 89 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGCGACCGGGGTTCGATTCCCCGA 148 Query 11794 CGAGGAGGGAGGTT 11807 | |||| || ||| Sbjct 149 CACGGAGAGATGTT 162 Score = 86.0 bits (94), Expect = 8e-12 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 562 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 621 Query 11794 CGAGGAG 11800 | |||| Sbjct 622 CACGGAG 628 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 628 CTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 569 Query 139413 TACTAACGAGGAT 139425 ||||||| |||| Sbjct 568 TACTAACACGGAT 556 >seq147940 Length=5469 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||||||||| |||| ||||| | |||| ||||||||||||||||||||| Sbjct 4902 GTTAGTATAGTGGTTAGTATGCCCGCCTGTCACGCGGGCGACCGGGGTTCGATTCCCCGA 4843 Query 8723 CGAGGAG 8729 | |||| Sbjct 4842 CACGGAG 4836 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 ||| | ||| |||||||||||||| |||||||||| ||||| | |||| |||||||||| Sbjct 4913 ACCAAATCCGTGTTAGTATAGTGGTTAGTATGCCCGCCTGTCACGCGGGCGACCGGGGTT 4854 Query 11783 CGATTCCCCGACGAGGAG 11800 |||||||||||| |||| Sbjct 4853 CGATTCCCCGACACGGAG 4836 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| ||||||||||||| |||| | |||| |||| ||| ||||||||| Sbjct 4836 CTCCGTGTCGGGGAATCGAACCCCGGTCGCCCGCGTGACAGGCGGGCATACTAACCACTA 4895 Query 139413 TACTAACGAGGATTT 139427 ||||||| |||||| Sbjct 4896 TACTAACACGGATTT 4910 >seq142975 Length=10079 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| ||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||| Sbjct 7997 CCAATCCGTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 8056 Query 11785 ATTCCCCGACGAGGAG 11800 |||||||||| |||| Sbjct 8057 ATTCCCCGACACGGAG 8072 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 8006 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 8065 Query 8723 CGAGGAG 8729 | |||| Sbjct 8066 CACGGAG 8072 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 8072 CTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 8013 Query 139413 TACTAACGAGGATT 139426 ||||||| ||||| Sbjct 8012 TACTAACACGGATT 7999 >seq82192 Length=1419 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 325 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 384 Query 8723 CGAGGAG 8729 | |||| Sbjct 385 CACGGAG 391 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 391 CTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 332 Query 139413 TACTAACGAGGATTT 139427 ||||||| |||||| Sbjct 331 TACTAACACGGATTT 317 Score = 86.0 bits (94), Expect = 8e-12 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 325 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 384 Query 11794 CGAGGAG 11800 | |||| Sbjct 385 CACGGAG 391 >seq39877 Length=3223 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 1835 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 1894 Query 8723 CGAGGAG 8729 | |||| Sbjct 1895 CACGGAG 1901 Score = 86.0 bits (94), Expect = 8e-12 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 1835 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 1894 Query 11794 CGAGGAG 11800 | |||| Sbjct 1895 CACGGAG 1901 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1901 CTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1842 Query 139413 TACTAACGAGGAT 139425 ||||||| |||| Sbjct 1841 TACTAACACGGAT 1829 >seq35616 Length=3306 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8663 GTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 8722 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 2254 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2313 Query 8723 CGAGGAG 8729 | |||| Sbjct 2314 CACGGAG 2320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 11735 GTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGA 11793 |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct 2254 GTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2313 Query 11794 CGAGGAGGGA 11803 | |||| || Sbjct 2314 CACGGAGAGA 2323 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2320 CTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2261 Query 139413 TACTAACGAGGATT 139426 ||||||| ||||| Sbjct 2260 TACTAACACGGATT 2247 >seq186939 Length=1863 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 8664 TTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGAC 8723 ||||||||||||| ||||| |||| ||||| | ||||||||| ||||||||||||||||| Sbjct 1499 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCTGGGTTCGATTCCCCGAC 1440 Query 8724 GAGGAG 8729 |||| Sbjct 1439 ACGGAG 1434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651111774515040