Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq184351 140 3e-28 seq114 131 2e-25 seq195337 89.7 5e-13 seq88155 84.2 2e-11 >seq184351 Length=2863 Score = 140 bits (154), Expect = 3e-28 Identities = 207/291 (71%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724 ||||||| || ||||||||||| |||||||||||||| | | || | | | Sbjct 2154 CCTCGTCTCGGCTGATCAGCTCGTTAGAGAACGTCAGGCCGGGGAGCAGCCCGCGCTTTT 2213 Query 120725 TGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGG 120784 | | |||| ||||| ||||| |||||| || |||||||||||||| || |||| Sbjct 2214 TCAGCCAGAAGATGGCCGCAAACGAGCCCGAGAAAAACACGCCCTCCACCGCAGCGAAGG 2273 Query 120785 CGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGG 120844 | || | |||||| | ||||||| ||||||| ||||||||| || ||||| || | Sbjct 2274 CCACAAGCCGCTCGCCGAACGTCGTGTCCTTGCTGGCGATCCACTGCAGCGCCCAGTCCG 2333 Query 120845 CCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCTCGCCCT 120904 |||| |||||||||||||| ||| | |||| | |||||| | |||||| || Sbjct 2334 CCTTGCGCCGCACGCACGGCATGGTCTCCACGGCGTGGAACAGCATCTGTCGCTCGGCCG 2393 Query 120905 CCTC-CGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGTGCACG 120954 || || | ||||| | || ||||| ||||||| |||| ||||||| Sbjct 2394 GGTCGCGGATGTAGCTG-TCAATCAGCAGGCTGTACATCTCCGAGTGCACG 2443 >seq114 Length=3964 Score = 131 bits (144), Expect = 2e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| || || ||| ||| | ||||| ||||||||||| ||| | || Sbjct 3083 TTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCCTCCAGCTGCTTGCCGGCGAAGAT 3025 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || |||||||| |||||||| |||||| ||| | | ||| Sbjct 3024 AAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTC 2965 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||||| ||||| || |||| ||||| ||| || |||||||| || || || || Sbjct 2964 GATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAA 2905 Query 133652 AATCTGCAT 133660 ||||||||| Sbjct 2904 AATCTGCAT 2896 >seq195337 Length=3657 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 |||||| || || ||||||| || ||||||| ||| || ||||| || ||||| || Sbjct 2721 CTCATCTGGTGCCGTGTACTCCACAATCTCGGTGCAGAGGTTGCTACACTTGATGGTCCC 2780 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 || ||| | || ||| ||| |||||||||| ||||||||||||||||| || Sbjct 2781 CAGGTTTTGCTGGTTGGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGG 2834 >seq88155 Length=6096 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 |||||| ||||| ||||||| || ||||| | ||| || || || || ||||| || Sbjct 1476 CTCATCTGGGGCCGTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCC 1417 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 || ||||| || || ||| |||||||||| ||||||||||||||||| || Sbjct 1416 CAGGTTCTGCTGGTTCGACTTCTTGTTGCACGCATCCTTGTACAGCATGTAGGG 1363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482137523229840