Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq118554 237 2e-57 seq46062 136 5e-27 >seq118554 Length=928 Score = 237 bits (262), Expect = 2e-57 Identities = 438/637 (69%), Gaps = 4/637 (1%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 || ||||| |||||||||| || || | ||| || || || || | || ||| Sbjct 254 ATATTGAGAGTGGGGAAGGGCCGCGGCTCCCTCCTCAATTGTTCATTAAGAGCATCGACG 313 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 || ||||| || ||||| ||||| |||||| | || |||||||| || ||||| | || Sbjct 314 TGATTGAGATAAACGTGAGCGTCTCCCAGGCTATGAACAAAGTCTCCAGGCTTTAATCCT 373 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || |||||||| | ||||||||| ||||| ||||| || || ||||| || || || Sbjct 374 GTGACGTGGGCTATCATGTAGGTCAGCAGACTATAGCTAGCAATATTGAAAGGAACGCCG 433 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111 || ||||||||||| || | ||||||||| ||||| |||||||| |||| |||||| Sbjct 434 AGCCCCATGTCCCCGGAGCGCTGGTACAGATGGCAGGAGAGCTCGCCGTTACAAACGTAA 493 Query 147112 AACTGG-CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 |||||| || | | || || || || |||| ||| ||||| || | |||||||| Sbjct 494 AACTGGACAAAAG-CATGACAGGGGGGTAGCGTCATCTTAGGCAGATCTGGTGGGTTCCA 552 Query 147171 GGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCT 147230 || || | | | || |||||| || |||| |||| | || ||| || Sbjct 553 TGCGGACATGATAATCCTCCTGCTATCAGGGTCATTCTTTACGGTTTGGATGACTTGGGC 612 Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 || ||||||||| ||||| ||| ||| | || | ||| || || ||||| Sbjct 613 CAACTGGTCCACACCCTGCCCCGTGTAATCCGTATGCCTATCCTTATATTCTGCACCAAA 672 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 ||||||||| || ||||| || || || |||| ||| || || ||| || | Sbjct 673 GTGCCTCCATTGAAAGCCATAGACAGGACCCAAGTCTCCCACCTCATAGTG-ATTTAGTC 731 Query 147351 CGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGG 147409 ||| || | | ||| || | || | || ||||||||| ||| ||| || ||| Sbjct 732 CGCGCCTGTCCAAAAAGTCTCGTGAACAGTTGGCGTCCCATATGTGCACCTTTTTATCGG 791 Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCC 147469 | || ||||| | || ||| ||||||| | | ||| | ||||| || | ||||||| Sbjct 792 ACAGATCCTTGGCGTTCGTACAGCCCCGAACAAGCCACAAAAGCTCTTCGACAACCCCCT 851 Query 147470 TCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG 147506 |||| || || | ||| |||||||||| || ||||| Sbjct 852 TCCAGAATACACGCTTCGTGGTCAGCAAAGGAAACTG 888 >seq46062 Length=4436 Score = 136 bits (150), Expect = 5e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | |||||| | |||||||||||| || ||||||||||| |||||||| Sbjct 425 CTTCAGTCCAGTGATGTGGGCTATCATGTAGGTGAGGAGAGAGTAGCTGGCGATGTTGAA 484 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || |||||| |||| || || | |||||||||||| || || ||||| |||| Sbjct 485 GGGAACGCCAAGGCCCGTGTCTCCAGAGCGCTGGTACAGCTGACATGACAGCTCACCGTT 544 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 |||||| |||||| | | ||| || || ||||||||||| Sbjct 545 ACACACGTAGAACTGGACGAAGGCGTGACAGGGAGGCAGCGCCAT 589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581939087342400