Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq211071 199 6e-45 seq184351 149 9e-30 seq12121 138 2e-26 seq150367 131 2e-24 seq142262 113 6e-19 >seq211071 Length=1307 Score = 199 bits (220), Expect = 6e-45 Identities = 183/232 (79%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| ||||||||||||||| |||| || ||||| |||| || Sbjct 852 ATCTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGGTGT------CTCCAGCAAGGCC 799 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || ||||||||||| |||| || |||| |||||| Sbjct 798 ATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGGATCGCTGGCGAGGCTTCC 739 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || |||||||||| ||| ||| ||| || |||||||||||||||||| Sbjct 738 CGCCTGGCGCACTACAACAAGCGCTCCACCATCAGCAGCCGGGAGATCCAGACCGCCGTG 679 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||||| ||||||| |||||||||| ||||||||||| Sbjct 678 CGCCTGCTGCTGCCTGGCGAGCTGGCCAAGCACGCCGTCAGCGAGGGCACCA 627 >seq184351 Length=2863 Score = 149 bits (164), Expect = 9e-30 Identities = 218/302 (72%), Gaps = 5/302 (2%) Strand=Plus/Minus Query 1455976 CCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACC 1456035 || ||||| || | || || || |||||||||||||| |||||| | ||||| || | Sbjct 2487 CCGGAGGCGCGCTGTTTCTATGGTTTCCAGATCGCCATGGAAAACGTGCACTCGGAGATG 2428 Query 1456036 TACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGC 1456095 ||| || ||||| |||| |||| || ||||||| |||| | || || | | Sbjct 2427 TACAGCCTGCTGATTGACAGCTACATCCGCGACCCGGCCGAGCGACAGATGCTGTTCCAC 2368 Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 ||| | || || |||||| ||| || ||||| ||||||||| || |||||||| | Sbjct 2367 GCCGTGGAGACCATGCCGTGCGTGCGGCGCAAGGCGGACTGGGCGCTGCAGTGGATC-GC 2309 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCT 1456214 || | || | |||| || | ||||||||| || | ||| || || || |||||| | | Sbjct 2308 CAGCAAGGACACGAC-GTTCGGCGAGCGGCTTGTGGCCTTCGCTGCGGTGGAGGGCGTGT 2250 Query 1456215 TTTTCTCGGGC-AGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273 ||||||||||| |||| | |||||||| ||||| || |||||||| || | ||||| Sbjct 2249 TTTTCTCGGGCTCGTTTGCG-GCCATCTTCTGGCTGAAAAAGCGCGGGCTGCTCCCCGGC 2191 Query 1456274 CT 1456275 || Sbjct 2190 CT 2189 >seq12121 Length=2376 Score = 138 bits (152), Expect = 2e-26 Identities = 135/174 (78%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||| |||||||||||||| || ||||| || |||| | || | ||||||| Sbjct 1288 CCATGGGCATCATGAACTCGTTCGTTAACGATCTGTTCGAGAGGATTGCTGGTGAGGCCG 1347 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 | ||| | ||| || |||||||||| ||| ||| ||| || |||||||||||||||| Sbjct 1348 GCCGCTTAGCGAACTACAACAAGCGCTCCACTATCAGCAGCCGGGAGATCCAGACCGCCG 1407 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| | ||| ||||| ||||||| |||||||||| ||||||||||| Sbjct 1408 TGCGCCTGCTGCTGCCTGGCGAGCTGGCCAAGCACGCCGTCAGCGAGGGCACCA 1461 >seq150367 Length=3699 Score = 131 bits (144), Expect = 2e-24 Identities = 262/385 (68%), Gaps = 10/385 (3%) Strand=Plus/Minus Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 |||||| ||||| | ||| || |||| || || ||||| | ||||| || ||||| Sbjct 2392 ATATGGCGGATGTAGAAGAAAA-CCTAGGCATCATTCTGGACAGTTGAGGAAGTAGACCT 2334 Query 1455836 CGGC---GCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAA 1455892 | | ||| || | |||||| | |||||| || ||| | | || |||||||| Sbjct 2333 CTCGAAAGAGGACTTGGCCTACTGGGAGAAGCTGAGTGATGACAAAAGACACTTCATCAA 2274 Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGG-----CATCGTGGCCGAGAACCTGGC 1455947 |||||||| || || ||| || || |||||||| || ||| ||||| |||| Sbjct 2273 ACACGTCCTGGCATTCTTT-GCGGCTAGCGATGGACAACCAACGTCAATGAGAATCTGGT 2215 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | | || | |||||||| | || | ||||| | | || || || ||||| || Sbjct 2214 GGAGAGATTCAGCCAAGAGGTCAAGGTGACCGAGGCCAGGTGCTTCTAGGGCTTCCAAAT 2155 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 ||||| ||||| || |||||||||| ||| ||| |||||||||||| | ||||||| Sbjct 2154 TGCCATGGAAAATATTCACTCTGAAATGTACAGTCTCTTGATCGACACCTTCATCAAGGA 2095 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 || |||||||| |||||||| || | || || ||||| | | ||| || Sbjct 2094 TCCACAGGAGAAGGAGCACCTCTTCAATGCGAATGAGACCACGCCGTGTGCAAAGAAGAA 2035 Query 1456128 GGCCGACTGGGCGATGAAGTGGATC 1456152 ||| || ||||| | | |||||| Sbjct 2034 GGCTGAATGGGCTCTTAGATGGATC 2010 >seq142262 Length=5470 Score = 113 bits (124), Expect = 6e-19 Identities = 147/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 1455746 TTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGC 1455805 ||||| |||| |||||||| ||||| || |||| |||||| || ||||| | || Sbjct 200 TTTGTAGTGTTTCCCATCCGGTACCACGACATGTGGGGCATGTAC-AAGAAGGCGCAAGC 142 Query 1455806 CTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCT 1455865 |||||| ||| || || ||||| || || || || |||| ||||| |||| || Sbjct 141 CTCCTTCTGGTGTGCAGAAGAGGTGGATCTTGGGAAGGATACGGCGGACTGGTTGTCACT 82 Query 1455866 GAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATG 1455925 || | |||||| | |||||| |||||| ||||| ||| ||||| |||||||| | Sbjct 81 GAAGCCGGCCGAGCGGCGGTTCATCTCGCACGTTCTCGC-TTTCTTCGCGGCCAGCGACG 23 Query 1455926 GCATCGTGGCCGAGAACCTGG 1455946 ||||||| ||||||||||| Sbjct 22 GCATCGTCAACGAGAACCTGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7157328108971292