Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq33786 174 2e-38 seq142507 147 3e-30 >seq33786 Length=3497 Score = 174 bits (192), Expect = 2e-38 Identities = 330/478 (69%), Gaps = 12/478 (3%) Strand=Plus/Minus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 ||||||||||||| || ||||| ||||||| |||| || || | |||||||| || | Sbjct 1917 TCTACCAGGCATCAACAAGTGAAATGTATGGACTGGTGCAGGAAATCCCACAGAAGGAGA 1858 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432 | || || ||||| ||| ||||||| ||||| | ||| || | |||| ||| ||| | | Sbjct 1857 CCACGCCATTCTATCCAAGATCTCCCTATGGAGCAGCGAAGGTATATGCATACTGGGTAG 1798 Query 161433 TAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATG 161492 | |||||||| ||| || ||| |||| ||| ||| || || |||||||| | Sbjct 1797 TGGTCAACTACAGGGAGGCCTACAACATGTTCGCCTGTAATGGGATCCTGTTCAACCACG 1738 Query 161493 AGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTA 161552 || ||| || |||| || || |||||||| | ||||| || || || | || | Sbjct 1737 AGAGTCCAAGAAGGGGGGAAACATTCGTAACGAGAAAGATAACCAGAGGCGTGGCCAAAA 1678 Query 161553 TTAGTACAGGACTACAGGATTGTC--TATACCTAGGTAATCTAAACTCAAGACGAGATTG 161610 | | || | || | || | |||| || || ||||| |||| | | ||||||| Sbjct 1677 TCCTTTTGGGGCAGCA-AAATGACATTATA-CTTGGAAATCTCGACTCTAAAAGAGATTG 1620 Query 161611 GGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGA 161670 ||| ||||| | ||||| | ||| |||||| |||| |||| || || || || Sbjct 1619 GGGACATGCCAAGGACTACGCCAGGGCGATGTGGATGATTCTACAGCATGAGGTGCCCGA 1560 Query 161671 TGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTG--AAGGACTTTGTAGAGGCATC- 161727 ||||| ||| || ||||||||| | ||| ||||| | ||| ||||||| ||| || Sbjct 1559 TGACTTTGTCATAGCCACAGGT--ACAGTTCACAGTGTAAGGGAGTTTGTAGTGGCGTCA 1502 Query 161728 -TGCTGAATACTTTGGTATGAAGATTGAGTGGCAGGGTGAAGGATTGGATGAAGTGGG 161784 | | ||| | || ||| | |||| ||| | |||||||| ||| | ||||| || Sbjct 1501 TTCAAGCATA--TAGGGATGGATATTGCTTGGGAAGGTGAAGGGTTGCAAGAAGTTGG 1446 >seq142507 Length=2538 Score = 147 bits (162), Expect = 3e-30 Identities = 261/378 (69%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 161315 TACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACA 161374 || |||||||| || || || |||||||| |||| || |||| |||||||| || || Sbjct 1791 TATCAGGCATCGACAAGCGAAATGTATGGGCTGGTGCAGGAGATTCCACAGAAGGAGACC 1850 Query 161375 ACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTGTA 161434 ||||| ||||| || |||| || ||||| | ||| || | |||| ||| ||||| || Sbjct 1851 ACACCATTCTATCCGAGATCCCCCTATGGAGCAGCGAAGGTATATGCATACTGGATAGTG 1910 Query 161435 AAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATGAG 161494 |||||||||||| || || ||| | | ||| || || |||||||| ||| Sbjct 1911 GTCAACTACAGAGAGGCCTACAATATATTTGCCTGCAATGGGATCCTGTTCAACCACGAG 1970 Query 161495 TCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATT 161554 ||| || |||| || || || ||||| | ||||| || || || | | || | | Sbjct 1971 AGTCCAAGAAGGGGAGAAACATTTGTAACGAGGAAGATAACCAGAGGTGT-TGCCAAAAT 2029 Query 161555 AGTACA-GGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGG 161613 | | || |||| || || | | ||| || ||||| |||| | |||||||||| Sbjct 2030 ATTTCACGGACAGCAAGACGATATTGTCCTTGGGAATCTTGACTCTAACAGAGATTGGGG 2089 Query 161614 TCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGA 161673 || || | ||||| || || |||||| |||| ||||| || || |||||||| Sbjct 2090 ACACGCCAAGGACTACGTCAGAGCCATGTGGATGATCTTACAGCATGAGGTGCCTGATGA 2149 Query 161674 CTATGTGATTGCCACAGG 161691 || ||| || ||||| || Sbjct 2150 CTTTGTTATAGCCACTGG 2167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 727991947132080