Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq118491 86.0 7e-12 >seq118491 Length=654 Score = 86.0 bits (94), Expect = 7e-12 Identities = 180/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 |||||| ||||||| ||| | || ||| |||| ||||| ||||| | || | | Sbjct 344 CCCACAACACATGTTGATGAGGGTAGCCCTCGGAATTCACTTTGAAGATTTAGACGCCGC 285 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCT 104339 | || || ||| || ||||| | | ||| || || || || ||||| ||||||| Sbjct 284 TATTGAAACCTACAACCTTATGTCGGA-GAAATGGTTTATACATGCCACACCGACCCTCT 226 Query 104340 TCAATGCTGGTA-CACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 | |||||||||| || |||| | ||| | | || || ||| | | | | || ||| Sbjct 225 TTAATGCTGGTACCAACAAG-GCTCAACTTGCGAGCTGTTTCTTGCTGACTATGAAAGAG 167 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || ||||||| | || ||| || | ||||||| | |||||| |||| ||| Sbjct 166 GACAGTATGGACGGTATATTTGAAACGCTGAAACAGTGTGCACTAATCTCCAAGTCCGCT 107 Query 104459 GGGGGTATTGGGATGCACATCCA 104481 ||||| || ||| | ||||||| Sbjct 106 GGGGGGATCGGGGTCAACATCCA 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581712490461840