Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq82958 138 1e-27 >seq82958 Length=1740 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||| ||||| || ||||||| ||| |||||||| Sbjct 906 TACTCGGCGCCAAAGTGCCTCCACTGGAAACCGTACACAGGGCCCAGGTCCCCCTCCTCA 965 Query 6959 CGAGATGGG--AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCT 7016 | ||| | || ||||||||||| |||||||| || |||| || |||||||| | Sbjct 966 TAA--TGGCTCAGTCCACGCTTGTCCAGGAAGTCTCGTGAACCGTTGGCATCCCAGATGT 1023 Query 7017 TCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCT 7076 |||| | || || |||||| || ||| || | |||||||||| |||| Sbjct 1024 GCACCTTTTTGTCGGAAAGTTCCTTGCCGTCCGTACAGCCGCGAACGAACCACAAGAGCT 1083 Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||| | || || ||||| |||||||||| || ||||||| ||||| Sbjct 1084 CCTCAGCGACCCCTCTCCAGAACACACGTTTTGTAGTCAGCAAAGGAAA 1132 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 ||||| ||||||| || |||||||||| ||||| || || | |||||||| ||||| Sbjct 1132 TTTCCTTTGCTGACTACAAAACGTGTGTTCTGGAGAGGGGTCGCTGAGGAGCTCTTGTGG 1073 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||||| | || ||| || |||||| || || | |||| | |||||||| Sbjct 1072 TTCGTTCGCGGCTGTACGGACGGCAAGGAACTTTCCGACAAAAAGGTGCACATCTGGGAT 1013 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--CCCATCTCGGGAGGAGGGCG 34397 || |||| || |||||||| ||||||||||| || | ||| | |||||||| | Sbjct 1012 GCCAACGGTTCACGAGACTTCCTGGACAAGCGTGGACTGAGCCA--TTATGAGGAGGGGG 955 Query 34398 ACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||||| || ||||| ||||||||||| |||||||| || ||||| Sbjct 954 ACCTGGGCCCTGTGTACGGTTTCCAGTGGAGGCACTTTGGCGCCGAGTA 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447072453839520