Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq114 156 1e-32 seq131419 89.7 1e-12 >seq114 Length=3964 Score = 156 bits (172), Expect = 1e-32 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| |||||||||||||| ||||||||| Sbjct 3083 TTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATA 3024 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| ||||| || ||| Sbjct 3023 AGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCG 2964 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 || ||||| || || |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 2963 ATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAA 2904 Query 211107 ACCTGCATTTT 211117 | ||||||||| Sbjct 2903 ATCTGCATTTT 2893 >seq131419 Length=1007 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || |||| ||||| | |||||| Sbjct 783 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 842 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||||||||| || |||||||| | || ||||| ||||| Sbjct 843 TCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGG 886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1155998017681590