Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq114 87.8 1e-12 >seq114 Length=3964 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| || || ||||| || || || || ||||| ||||| || || | Sbjct 2893 AAAATGCAGATTTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTCGAGCCG 2952 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| | || ||| | || | || || ||||| || || | |||||||| Sbjct 2953 TCCGACACTATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCAGA 3011 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || |||||| | || || |||||||| || ||||| || | ||||| | || || Sbjct 3012 CCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCTGACTA 3071 Query 23787 CAACATACAAAA 23798 |||||| || || Sbjct 3072 CAACATCCAGAA 3083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337134759961928