Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq125144 118 3e-21 seq114 116 9e-21 >seq125144 Length=2785 Score = 118 bits (130), Expect = 3e-21 Identities = 130/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 7554 ACTT-TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGC 7612 |||| || ||||| || |||| || ||||| || || || ||||||||| | ||||| | Sbjct 1000 ACTTATATAACGTAATCGTTACTGCCCATGCTTTCGTAATAATTTTCTTTATAGTTATAC 1059 Query 7613 CGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATA 7672 | || || || || || || || || || || || || ||||||||||||| ||||||| Sbjct 1060 CTGTAATAATTGGAGGCTTTGGTAACTGGTTAGTACCAATAATGATTGGTGCACCTGATA 1119 Query 7673 TGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 | || ||||| | | ||||||||||| |||||| | || || || ||||| Sbjct 1120 TAGCATTTCCCCGAATGAACAATATAAGCTTTTGAATGCTTCCTCCCTCCTT 1171 >seq114 Length=3964 Score = 116 bits (128), Expect = 9e-21 Identities = 148/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 225516 AGTGGATT--CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTC 225573 ||||| || | || |||| ||||| || | || || | ||||| || |||||||| Sbjct 3095 AGTGGCTTACCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCCTCCAGCTGCTTG 3036 Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || ||||||||||| || || ||||| ||||| || || |||||||| |||||||| | Sbjct 3035 CCGGCGAAGATAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCC 2976 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| ||||| ||||| || | || || || | ||||| ||||| || |||| Sbjct 2975 TTCACATTCTCGATAGTGTCGGACGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGG 2916 Query 225694 GTTTTTATGAACACTTGCATTTT 225716 || || | || | |||||||| Sbjct 2915 GTCTTCACAAAAATCTGCATTTT 2893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189286394902004