Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq118554 279 4e-70 seq46062 132 4e-26 seq82958 129 4e-25 >seq118554 Length=928 Score = 279 bits (308), Expect = 4e-70 Identities = 471/675 (70%), Gaps = 8/675 (1%) Strand=Plus/Plus Query 27061 TTAAAGTCGTCCA-GGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGG 27119 ||||||||||| | |||| || || | | || || | || ||||| ||||| | || Sbjct 221 TTAAAGTCGTCGATGGCTTTC-ACGCGGCAATTGATATTGAGAGTGGGGAAGGGCCGCGG 279 Query 27120 CTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCC 27179 ||||||| | || || || | || ||||||| || || |||||||||||||| Sbjct 280 CTCCCTCCTCAATTGTTCATTAAGAGCATCGACGTGATTGAGATAAACGTGAGCGTCTCC 339 Query 27180 CAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAG 27239 |||| | || ||||| ||||| || | || || |||||||| || |||||||| || || Sbjct 340 CAGGCTATGAACAAAGTCTCCAGGCTTTAATCCTGTGACGTGGGCTATCATGTAGGTCAG 399 Query 27240 GAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 27299 ||| ||||| || || || || || || ||||||||||||||||| || | |||||| Sbjct 400 CAGACTATAGCTAGCAATATTGAAAGGAACGCCGAGCCCCATGTCCCCGGAGCGCTGGTA 459 Query 27300 GAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACT-GACATATGGCGTGGCACGGAG 27358 || || || |||||||| || | | |||||||||| |||| | || || || || | Sbjct 460 CAGATGGCAGGAGAGCTCGCCGTTACAAACGTAAAACTGGACA-AAAGCATGACAGGGGG 518 Query 27359 GAAGAGCCA--TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTC 27416 | || | || | ||| || ||| |||||||| ||| ||| ||| || | |||| Sbjct 519 GTAGCGTCATCTTAGG--CAGATCTGGTGGGTTCCATGCGGACATGATAATCCTCCTGCT 576 Query 27417 TTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGA 27476 || |||| ||| | | | | | | | | || ||| ||||| ||| ||||| Sbjct 577 ATCAGGGTCATTCTTTACGGTTTGGATGACTTGGGCCAACTGGTCCACACCCTGCCCCGT 636 Query 27477 GTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACAC 27536 ||| || | | ||| | || ||||| || || ||||||||||| || || || || Sbjct 637 GTAATCCGTATGCCTATCCTTATATTCTGCACCAAAGTGCCTCCATTGAAAGCCATAGAC 696 Query 27537 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGA 27596 || |||| ||||||| | || ||| | | || | | ||||||||||||||| || Sbjct 697 AGGACCCAAGTCTCCCACCTCATAGTGATTTAGTCCGCGCCTGTCCAAAAAGTCTCGTGA 756 Query 27597 ACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 || |||||||||||| || | ||| || ||||| || || |||| ||| || | || Sbjct 757 ACAGTTGGCGTCCCATATGTGCACCTTTTTATCGGACAGATCCTTGGCGTTCGTACAGCC 816 Query 27657 TCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 27716 | || | ||||| ||||| || || || ||||||| || || | ||| || || || Sbjct 817 CCGAACAAGCCACAAAAGCTCTTCGACAACCCCCTTCCAGAATACACGCTTCGTGGTCAG 876 Query 27717 GAGGGGAAACTGTCC 27731 | ||||||||||| Sbjct 877 CAAAGGAAACTGTCC 891 >seq46062 Length=4436 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| |||||||||||||||||||||||||| ||||| Sbjct 429 AGTCCAGTGATGTGGGCTATCATGTAGGTGAGGAGAGAGTAGCTGGCGATGTTGAAGGGA 488 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || ||| |||| || || | |||||| |||||||| || ||||| || | | Sbjct 489 ACGCCAAGGCCCGTGTCTCCAGAGCGCTGGTACAGCTGACATGACAGCTCACCGTTACAC 548 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||||| ||||| | |||||| || ||||| || ||||| Sbjct 549 ACGTAGAACTGGACGAAGGCGTGACAGGGAGGCAGCGCCAT 589 >seq82958 Length=1740 Score = 129 bits (142), Expect = 4e-25 Identities = 174/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 27493 TCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCC 27552 ||| ||||||| || || || |||||||| ||||| |||||||| || |||||||| ||| Sbjct 900 TCCTTGTACTCGGCGCCAAAGTGCCTCCACTGGAAACCGTACACAGGGCCCAGGTCCCCC 959 Query 27553 TCTTCCCTGTG-CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCA 27611 || || || ||| | || | |||||||| ||||||| ||||||||||| ||||| Sbjct 960 TCCTCATAATGGCTC-AGTCCACGCTTGTCCAGGAAGTCTCGTGAACCGTTGGCATCCCA 1018 Query 27612 GATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 27671 ||| | ||| || ||||| || || ||| || || | || | |||||||||| Sbjct 1019 GATGTGCACCTTTTTGTCGGAAAGTTCCTTGCCGTCCGTACAGCCGCGAACGAACCACAA 1078 Query 27672 CAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCC 27731 |||||||| |||| | |||| || || | || || || || | |||||||| || Sbjct 1079 GAGCTCCTCAGCGACCCCTCTCCAGAACACACGTTTTGTAGTCAGCAAAGGAAACTGCCC 1138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368550837538946