Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq150367 212 9e-50 seq118491 127 3e-24 seq195337 104 3e-17 >seq150367 Length=3699 Score = 212 bits (234), Expect = 9e-50 Identities = 575/875 (66%), Gaps = 30/875 (3%) Strand=Plus/Plus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| |||||||| || || || || || |||||||| || || | || || Sbjct 1548 GACATCACTCCCATCTTCTGGTACTCTCCTGGCTTCTTCTCGAAGAAGTTGGCCTTCCCC 1607 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 |||| || || || ||||| || ||||| ||||| || || || || | | Sbjct 1608 TCCAGGGAGATGTTCTCCATGAAGTCAAAAGGATTG------TTGTAGATCTTACTGCAC 1661 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAA 48014 | | ||| | || | |||| || || | ||||| |||| ||| ||| Sbjct 1662 TCGAGTTCACCCAATAGCCGGCCTGCTACAAACACGATATACTGTTTCCTCAGGTCATTT 1721 Query 48015 TTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACA 48074 ||||| || || || || | || ||||||||||| || ||||| || | || | || Sbjct 1722 TTCATACCAATCAGCTTCAGGGGAAGAGCCTCCGTCAGGAACTCCTGAGCAATCTTCACG 1781 Query 48075 GCATCCACTATTATCGATGTTACCGTTTCCTCACTTGG-TGGATACAACAAATGTTTAAA 48133 |||| | || ||| | | |||||||| || | | || | ||||||| || Sbjct 1782 GCATTGTCGATGATCTCGTGGATGGGCTCCTCACTAGGCTTGTTA-ACCAAATGTCCGAA 1840 Query 48134 CATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAA 48193 ||| | ||| ||||| ||||| || || || ||||| ||||| || | ||| || || || Sbjct 1841 CATCAGACAGGCAAAGTCACAGTGTAGGCCCTCATCCCTACTGATCAGTTCATTGGAGAA 1900 Query 48194 TGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGA 48253 || || |||| ||||| || ||||| ||||||| | || || || || || || Sbjct 1901 CGTCAGCCCGG-CATTATCCCTATCTTTTTCAGCCAAATGTTAGCTGCAAAGGAGCCCGA 1959 Query 48254 AAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT 48313 || || ||| |||| || || ||| || | | | || | | || || || Sbjct 1960 GAAAAAGATGTCTTCCACCGCATTAAAGGC----AACCACGCTGCAT---TGTCTCCG-- 2010 Query 48314 GTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373 ||||| | | ||||| ||||||||||||||| |||| ||| | || || | || Sbjct 2011 ----ATCCATCTAAGAGCCCATTCAGCCTTCTTCTTTGCACACGGCGTGGTCTCATTCGC 2066 Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433 ||| ||||| | || || | ||| || | | | || || || || ||||| || Sbjct 2067 ATTGAAGAGGTGCTCCTTCTCCTGTGGATCCTTGATGAAGGTGTCGATCAAGAGACTGTA 2126 Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493 |||||| |||||||||||||| || || || || || || || || || || || || || Sbjct 2127 CATTTCAGAGTGAATATTTTCCATGGCAATTTGGAAGCCCTAGAAGCACCTGGCCTCGGT 2186 Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC-----TATTCCATCA 48548 | || ||||| | |||| || ||| ||||||||| || | |||||| Sbjct 2187 CACCTTGACCTCTTGGCTGAATCTCTCCACCAGATTCTCATTGACGTTGGTTGTCCATCG 2246 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTA 48608 ||||| ||||| ||||| | || ||||| || || | | ||| || | |||| || Sbjct 2247 CTAGCCGCAAAGAATGCCAGGACGTGTTTGATGAAGTGTCTTTTGTCATCACTCAGCTTC 2306 Query 48609 TTCCAGT---CATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 | ||||| | | ||||| || | |||||||| ||| ||||||| ||||||||| Sbjct 2307 TCCCAGTAGGCCAAGTCCTCTTTCGAGAGGTCTACTTCCTCAACTGTCCAGAATGATGCC 2366 Query 48666 TCTGCTTTTTTATACATATTCCATATATCACTGTA 48700 | | ||| || ||||| |||||| || | ||| Sbjct 2367 TAGGTTTTCTTCTACATCCGCCATATGTCGCGGTA 2401 >seq118491 Length=654 Score = 127 bits (140), Expect = 3e-24 Identities = 288/430 (67%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 |||| |||||| || | || || ||||| ||||||| || || ||||| ||||| Sbjct 9 ACTCGCAACATGGGGAGAAGGCCATTAGAGATTCCATTGGTCCCCGAAATTACGCTTCCT 68 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || | || || ||| | ||| || || || || ||| || ||||| || Sbjct 69 GTGGCCCTGATCTTGTGGATGTTGACCCCGATCCCCCCAGCGGACTTGGAGATTAGTGCA 128 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || |||||| || || | ||||| || |||||||| || |||| | || | ||| Sbjct 129 CACTGTTTCAGCGTTTCAAATATACCGTCCATACTGTCCTCTTTCATAGTCAGCAAGAAA 188 Query 78375 CAGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||||| | | |||| || || || || |||||||| | ||||| | ||||| Sbjct 189 CAGCTCGCAAGTTGAGCCTTGTTG----GTACCAGCATTAAAGAGGGTCGGTGTGGCATG 244 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATT 78489 |||||||||| || || | || ||||| ||||||||||| | |||| || || Sbjct 245 TATAAACCATTTCTCCGACATAAGGTTGTAGGTTTCAATAGCGGCGTCTAAATCTTCAAA 304 Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTAT 78549 | |||||||| | ||||| | ||||||||| || || || | ||||| || || Sbjct 305 G-TGAATTCCGAGGGCTACCCTCATCAACATGTGTTGTGGGCGCTCAACTACTTTCCCAT 363 Query 78550 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 78609 |||||| | | ||| || | || | ||||| | ||||| || |||| | ||||| Sbjct 364 CTATTTTGAGTAGGTACGACCTCTCTAGGGTTTTGATGCCAAAGTACGTGTACGTAAAGT 423 Query 78610 CTCTCTCGTA 78619 | | ||||| Sbjct 424 CACGGTCGTA 433 >seq195337 Length=3657 Score = 104 bits (114), Expect = 3e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 76843 CCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATAT 76902 |||| ||||||||||||| ||||||||||| | ||| || | || ||||| || | Sbjct 390 CCAGCTTCCATCCGTAGAAGTGCATGCTTGTGATTTTCCCGTAGTTCGGCTCGGCGATGT 449 Query 76903 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 76962 |||| |||| |||||| ||||| |||||||| || || | || |||||||| || || | Sbjct 450 GAATGTTCAGCGACTGGCTTTGGTCGATGAAGGCACCGCGGTCGGCCGCCATCTTGATCA 509 Query 76963 TGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017 ||| || || | ||| ||||| | || ||| | | || ||||| ||||| Sbjct 510 CGGTTTTCTGCGAAATCTCCCAGACGGTCTTGTATAGTTCACGTATATCCTCTGG 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692824749570240