Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq150367 100 3e-16 >seq150367 Length=3699 Score = 100 bits (110), Expect = 3e-16 Identities = 306/470 (65%), Gaps = 26/470 (6%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||| | ||| ||||| ||||| |||||||| ||||||||||| |||| |||||| || Sbjct 1839 AACATCAGACAGGCAAAGTCACAGTGTAGGCCCTCATCCCTACTGATCAGTTCATTGGAG 1898 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || | | | || ||||||| ||| ||||| | ||||| | || ||||| || || Sbjct 1899 AACG-TCAGCCCGGCATTATCCCTATCTTTTTCAGCCAAATGTTAGCTGCAAAGGAGCCC 1957 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || || | || || || |||||| || | | |||||| Sbjct 1958 GAGAAAAAGATGTCTTCCACCGCATTAAAGGCAAC-------------CACGCTGCATTG 2004 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | || | |||||| | | ||| | ||||||| ||| ||||| | || ||| Sbjct 2005 T-CTCCG--ATCCATCTAAGAGCCCATTCAGCCTTCTTCTTTGCACACGGCGTGGTCTCA 2061 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATTAGTA 23797 | || || ||||| | | |||| | | ||| | || | || || || | | Sbjct 2062 TTCGCATTGAAGAG--GTGCTCCTTCTCCTGTGGATCCTTGATGAAGGTGTCGATCAAGA 2119 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 ||| ||||||||||| ||||||||||| || ||||| || || || || || || || | Sbjct 2120 GACTGTACATTTCAGAGTGAATATTTTCCATGGCAATTTGGAAGCCCTAGAAGCACCTGG 2179 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT----- 23912 | || | || | || || | ||||| | | | ||| || || || | Sbjct 2180 CCTCGGTCACCTTGACCTCTTGGCTGAATCTCTCCACCAGATTCTCATTGACGTTGGTTG 2239 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT 23962 ||||| ||||| |||||||| || || || | ||| || || ||||||| Sbjct 2240 TCCATCGCTAGCCGCAAAGAATGCCAGGACGTGTTTGATGAAGTGTCTTT 2289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520103670992400