Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq114 132 1e-25 seq90790 89.7 1e-12 >seq114 Length=3964 Score = 132 bits (146), Expect = 1e-25 Identities = 146/194 (75%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | ||||| ||||| || || || || || || |||||||||||||| || Sbjct 2893 AAAATGC---AGATTTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTCGAG 2949 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| |||||||| || || ||||| |||||||| || || ||||| || Sbjct 2950 CCGTCCGACACTATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCA 3009 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || |||||||||||||| || ||||| || ||||| | || || | || Sbjct 3010 GACCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCTGAC 3069 Query 178095 TATAACGTCCAAAA 178108 || ||| |||| || Sbjct 3070 TACAACATCCAGAA 3083 >seq90790 Length=3890 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || || || |||||||| ||||| || |||||| Sbjct 1164 CAGATCTTTGTGAAAACCCTGACCGGGAAGACCATCACCCTTGAGGTCGAGCCTTCAGAC 1105 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||||| || ||||| ||||| || ||||| || || ||||| || |||||||| Sbjct 1104 ACCATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAGCA 1046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200455920381004