Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq64 104 5e-17 >seq64 Length=206549 Score = 104 bits (114), Expect = 5e-17 Identities = 384/590 (65%), Gaps = 15/590 (3%) Strand=Plus/Plus Query 292163 GGCACTCCCTCGAAATTAGCCAGCAGTTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCA 292222 |||||| | | | |||| || || || || || |||||||| || || || ||| | ||| Sbjct 42320 GGCACTTCGTTGTAATTTGCGAGAAGCTGTTTAGTATCCTTCGGCAAACAGTAACCGCCA 42379 Query 292223 TAACCGAACGAAGGGTTTGAGTACCCCTGACCAATGCGAGGCTCCAGAGTCACACCATCA 292282 || || ||||| || || || | ||||| || || || | | ||| |||||| Sbjct 42380 TAGCCAAACGAGGGATTGTTATAGTGATTGCCAATACGCGGATCTAAACACACGCCATCA 42439 Query 292283 ATGATTTCTTTCGCATTCATACCGTGAGACATTGCGAAT--GTATCTAGTTCGTTGAAGT 292340 || |||| || | || || ||| | || ||| || || ||||| || || || |||| Sbjct 42440 ATAATTTGCTTAGAATCCAAACC-TAAGG-ATTCCGCATAGGTATCCAGCTCATTAAAGT 42497 Query 292341 ATGCAACTCGCATTGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGCGAG 292400 | ||||| ||||| || | || |||||||| || || || | |||||||||||| || Sbjct 42498 AAGCAACCCGCATCGCCAAGTAGGTGTTAGAAAACAGCTTAATTGCCTCGGCTTCGGTAG 42557 Query 292401 TTCCCATCGTCAGGACAGGGGCAAGCGGAGTTTTAGAACCTTCA-ACGAGAAGGTTTGCG 292459 || | || || | || | | ||| |||||| || | || | || Sbjct 42558 AACCGGTAAACAACACCTCGACATCTTGCTTAATAGCGCCTTCACACAACAA-GCCAGCA 42616 Query 292460 A--ACTTAAGCGCAATGGGGGAATCATCTCCTACGATGATACGGGATGGGTAGAGATTAT 292517 | |||| || | | || | || || || | |||||||||||||| ||||| | Sbjct 42617 AACACTTTTGCCCGCT--CCGACTGCTCACCAACCACAATACGGGATGGGTATAGATTGT 42674 Query 292518 CATACAAGGCTCTACCTTCACGCAGAAATTCTGGGGAGAAAATGATATTTTGGTAGTCGA 292577 | |||| ||| | |||||||| | ||| ||||| || || | | | | | | | Sbjct 42675 CGTACAGGGCCTTGCCTTCACGTAAAAACTCTGGCGAAAACAGCACCTGCTCGGTTCCCA 42734 Query 292578 ATTGCTCACGAACCTTATCAACAAATCCAATGGGGATGGTAGATTTAATCACGATAGTTG 292637 | | ||| || || ||| | ||| || | || | ||| ||||||| ||| ||||| | Sbjct 42735 ACTCCTCTCGCACACTATTGATAAAACCCACCGGCACGGTCGATTTAACCACCATAGTCG 42794 Query 292638 GA-TGGGTCTGTGTATTTTTGATCACGTCCCCAATGACGTTTTCCACAGATTTCGTGTTA 292696 | |||| || |||| || || |||| ||| || || || || ||| ||| Sbjct 42795 CAGTGGG---GTTAATTTCAGA-AACATCCCGAATAACCGCCTCAACCGAACGCGTATTA 42850 Query 292697 AAATACCTAGTAACCACGTCATAGTCAGTCGGGGTTGCGATGATGACAAA 292746 || || | || || ||| || ||||| || || || || || ||||| Sbjct 42851 AAGTAGTTGGTGACGGGGTCGTAATCAGTAGGAGTAGCAATAATTACAAA 42900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821682373730