Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq63 102 1e-16 seq16 87.8 3e-12 seq72 84.2 4e-11 >seq63 Length=71243 Score = 102 bits (112), Expect = 1e-16 Identities = 70/78 (90%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 273270 ATGGTCGGAGTGGGGAGACTCGAACTCCCGACATCCTGCTCCCAAAGCAGGCGCGCTACC 273329 ||||||||||||| | || |||||| |||||||| ||||||||||||||| ||||||||| Sbjct 15141 ATGGTCGGAGTGGAGGGATTCGAACCCCCGACATTCTGCTCCCAAAGCAGACGCGCTACC 15200 Query 273330 A-ACTGCGCTACACTCCG 273346 | ||||||||||||||| Sbjct 15201 AGGCTGCGCTACACTCCG 15218 >seq16 Length=186255 Score = 87.8 bits (96), Expect = 3e-12 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 271732 TTTAGAATATGGCTCCGTGACCTGGACTCGAACCAGGGACCCAGTGATTAACAGTCACTT 271791 |||| ||| |||||||| |||| |||||||||| |||| | ||||||||||||| || Sbjct 142582 TTTA-AATTTGGCTCCGCCTGCTGGGCTCGAACCAGCGACCTAATGATTAACAGTCATTT 142640 Query 271792 GCTCTACCGACTGAGCTATCACGGAATT 271819 |||||||| ||||||||| ||||||| Sbjct 142641 GCTCTACCAACTGAGCTAAGGCGGAATT 142668 >seq72 Length=394956 Score = 84.2 bits (92), Expect = 4e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 272868 TATATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCT 272927 || |||||||||| | ||||||||| | |||| ||||||||||||| |||||| Sbjct 191794 TAAATGGTGGGCCTTCCCAGACTTGAACTGGGGACCTGCCGATTATGAGTCGGATGCTCT 191853 Query 272928 AACCAACTGAGCTATAGGCCCTTT 272951 |||||||||||||| ||||||||| Sbjct 191854 AACCAACTGAGCTAAAGGCCCTTT 191877 Score = 84.2 bits (92), Expect = 4e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 272871 ATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAAC 272930 |||||||||| | ||||||||| | |||| ||||||||||||| ||||||||| Sbjct 217102 ATGGTGGGCCTTCCCAGACTTGAACTGGGGACCTGCCGATTATGAGTCGGATGCTCTAAC 217161 Query 272931 CAACTGAGCTATAGGCCCTTT 272951 ||||||||||| ||||||||| Sbjct 217162 CAACTGAGCTAAAGGCCCTTT 217182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896938882789040