Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq64 91.5 3e-13 >seq64 Length=206549 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 306490 GGCACCCCCTCGAAATTAGCCAGCAATTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCG 306549 ||||| | | | |||| || || | || || |||||||| || || || ||| | || Sbjct 42320 GGCACTTCGTTGTAATTTGCGAGAAGCTGTTTAGTATCCTTCGGCAAACAGTAACCGCCA 42379 Query 306550 TAACCGAACGATGGATTCGAATATCCCTGGCCAATTCGAGGTTCTAGAGTAACACCATCG 306609 || || ||||| ||||| ||| | |||||| || || |||| | || ||||| Sbjct 42380 TAGCCAAACGAGGGATTGTTATAGTGATTGCCAATACGCGGATCTAAACACACGCCATCA 42439 Query 306610 ATGATTTCTTTCGCATTCATATCATGAGACATTGCGAAT--GTATCTAGTTCGTTGAAGT 306667 || |||| || | || || | | | || ||| || || ||||| || || || |||| Sbjct 42440 ATAATTTGCTTAGAATCCAAACC-TAAGG-ATTCCGCATAGGTATCCAGCTCATTAAAGT 42497 Query 306668 ATGCAACTCGCATTGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCG 306723 | ||||| ||||| || | || |||||||| || || || | |||||||||||| Sbjct 42498 AAGCAACCCGCATCGCCAAGTAGGTGTTAGAAAACAGCTTAATTGCCTCGGCTTCG 42553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877583658850