Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq155 87.8 2e-12 seq63 84.2 2e-11 >seq155 Length=46119 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 105502 CAAATTTTTAGGAGAAGTGGATGAGCGGCTGAAATCGCTTCCCTGCTAAGGAAGTAAACC 105561 ||| ||||| ||||| |||| ||| ||| ||| |||| ||||||||||| |||| ||| Sbjct 10085 CAAGTTTTTCGGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATACC 10144 Query 105562 GAAA---GGTTTCGAGAGTTCAAATCTCTCCTTCTCCGCCAAAT 105602 || ||| ||||| ||||||||| |||| ||||||||| || Sbjct 10145 CTAAACCGGTATCGAGGGTTCAAATCCCTCCCTCTCCGCCATAT 10188 >seq63 Length=71243 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 106692 TAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCC 106747 |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| Sbjct 14996 TAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCACAGGTTCAAATCC 14941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524270879368600