Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq13 107 1e-17 >seq13 Length=70205 Score = 107 bits (118), Expect = 1e-17 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT-T 518226 ||||| | ||| || || ||||| ||||| ||||| || || ||||| | | ||||| | Sbjct 22635 TTATCCATACCGTAGGCCAAAGCCGCAGCCGTTGGCTCGTTGATAATACGCTTAACATCT 22576 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 ||| ||||| || | || ||||||||||| || || | || ||||| ||||| || || Sbjct 22575 AAG-CCAGCGATCTTGCCAGCATCTTTAGTTGCCTGACGCTGCGAATCATTAAAGTAAGC 22517 Query 518287 AGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346 || || |||||||| || || ||||| ||| ||||| |||| | || || | || Sbjct 22516 CGGTACGGTAATAACCGCTTCCGTTACCGCTTCACCAAGATAATCTTCAGCGGTCTTCTT 22457 Query 518347 CATTTT 518352 |||||| Sbjct 22456 CATTTT 22451 Score = 87.8 bits (96), Expect = 1e-11 Identities = 199/296 (67%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 |||||| | |||||| |||||||| | ||| || || ||||||||||| || | || | Sbjct 23545 CACATTCAAAATACCGTTGGCATCAATATCGAAGGTCACTTCAATTTGTGGCATGCCGCG 23486 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 | | || ||||| || | |||| | ||| ||||| | || || | ||| Sbjct 23485 CGGCGCGGGTGGAATATCAGCCAAGTCAAAACGTCCCAAAGATTTGTTTTGGCTAGCTTG 23426 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 || || ||||||| | | || ||||| || |||||||||| || | || | Sbjct 23425 CTTACGCTCACCCTGAACTACGTGAATAGTTACCGCAGTTTGATTGTCGTCAGCGGTCGA 23366 Query 517444 AAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502 |||||| ||| ||||||||| || || || ||||| | || || | | ||| || Sbjct 23365 AAATAC-CTGTGATTTTTTAGTCGGGATGGTCGTGTTCTTCTCGATCAAAGCCGTCGCAA 23307 Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558 |||||| || ||||| | ||| || | || || | ||||||| ||| ||||| Sbjct 23306 CACCACCAGCAGTTTCAATACCGAGGGTTAGCGGGCTCACATCAAGTAG--CAATA 23253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780813914416726