Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq64 214 2e-50 seq13 111 2e-19 >seq64 Length=206549 Score = 214 bits (236), Expect = 2e-50 Identities = 295/409 (72%), Gaps = 8/409 (2%) Strand=Plus/Minus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 ||||| || || || || || || || ||||| ||||| | |||| || ||||| ||| Sbjct 60221 TTTTACCAAGCCTCAACCTCCGAACTGTACGGCGAAGTACAAGAAATACCCCAAAAAGAA 60162 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || |||||| ||||||||||||| || | |||||| ||| || | || ||| Sbjct 60161 ACAACTCCGTTTCACCCGCGTTCACCCTACGCGGTAGCCAAAATGTACGCCTACTGGATT 60102 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 ||||||||| | ||||| |||||||||| ||| || || ||||| |||| || ||| Sbjct 60101 GTGGTTAATTATCGTGAATCTTACGGTATGTATGCCTGTAACGGTATTTTGTTTAATCAC 60042 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAAT 22683 ||||| ||| | || || |||| ||| || || |||||||| |||| ||| | || ||| Sbjct 60041 GAATCGCCGCGCCGTGGCGAAACCTTTGTAACGCGAAAAATTACACGCGGCATAGCCAAT 59982 Query 22684 ATCAGTGC---AGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGAT 22740 || ||| |||| | |||| || |||||||| ||||| | ||||| || ||| Sbjct 59981 AT---TGCCCAAGGTTTAGAAAAGTGCTTATACCTGGGTAATATGGATGCCTTGCGTGAT 59925 Query 22741 TGGGGTCATGCACGCGATTACG-TGAAATGTATGTGGAAAATATTACAACAAGATAAACC 22799 |||||||| ||| ||||| | | ||| | ||||| || || || |||||| | Sbjct 59924 TGGGGTCACGCAAAAGATTATGTTCGCATGCA-GTGGATGATGTTGCAGCAAGATGTGGC 59866 Query 22800 GGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCGTGAGAGAATTT 22848 |||||||||||| ||||| |||||| | || || ||| | |||||| Sbjct 59865 GGAAGATTTTGTAATTGCCACAGGCAAACAAATAAGTGTGCGTGAATTT 59817 >seq13 Length=70205 Score = 111 bits (122), Expect = 2e-19 Identities = 176/249 (71%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 |||| ||| || ||||||||||||| || | | || | ||| |||| ||| Sbjct 22695 GAAATATCGAAGGTACCACCACCCAAATCGTA---TACCGCGATAGTACGGTCGCCTTGA 22639 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 |||||| | |||||| || | |||||| |||||||| || || |||||||| | Sbjct 22638 GCCTTATCCATACCGTAGGCCAAAGCCGCAGCCGTTGGCTCGTTGATAATACGCTTAACA 22579 Query 7655 TTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 | | |||||| || ||||| |||||||| || || || || |||||||| |||||||| Sbjct 22578 TCTAAGCCAGCGAT-CTTGCCAGCATCTTTAGTTGCCTGACGCTGCGAATCATTAAAGTA 22520 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||||| || || | ||||| ||||| || | ||| ||||| ||| ||| | | Sbjct 22519 AGCCGGTACGGTAATAACCGCTTCCGTTACCGCTTCACCAAGATAATCTTCAGCGGTCTT 22460 Query 7774 TTTCATTTT 7782 |||||||| Sbjct 22459 CTTCATTTT 22451 Score = 98.7 bits (108), Expect = 1e-15 Identities = 225/334 (67%), Gaps = 6/334 (2%) Strand=Plus/Minus Query 6667 TTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAA 6726 ||| |||| || ||||| | || |||||||||||||| || ||||||| |||||| Sbjct 23572 TTTGCCCGTAGCTTTATCCTGTGCGGACACATTCAAAATACCGTTGGCATCAATATCGAA 23513 Query 6727 CCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATC-AAATG 6785 | || | ||||||||| | || | ||| |||| ||||||| | | || || ||| | Sbjct 23512 GGTCACTTCAATTTGTGGCATGCCGCGCGGCGCGGGTGGAATATCAGCCAAGTCAAAACG 23453 Query 6786 TACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCA 6845 | |||| | |||| | | || | |||||| ||||| | | || | ||| || | Sbjct 23452 TCCCAA-AGATTTGTTTTGGCTAGCTTGCTTACGCTCACCCTGAACTACGTGAATAGTTA 23394 Query 6846 CCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCG 6905 |||||| |||||| || | || || || || | ||| ||| |||| || || |||| Sbjct 23393 CCGCAGTTTGATTGTCGTCAGCGGTCGAAAATACCTGTGATTTTTTAGTCGGGATGGTCG 23334 Query 6906 TAT--TTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAG 6963 | | |||||| || | | ||| || |||||| |||||| | || || | || Sbjct 23333 TGTTCTTCTCG--ATCAAAGCCGTCGCAACACCACCAGCAGTTTCAATACCGAGGGTTAG 23276 Query 6964 AGGTGTCACGTCCAAGAGTAACAGGTCTTGAACA 6997 || |||| || | || || | |||| |||| Sbjct 23275 CGGGCTCACATCAAGTAGCAATACATCTTTAACA 23242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131442403640