Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq65 134 2e-26 >seq65 Length=266375 Score = 134 bits (148), Expect = 2e-26 Identities = 324/484 (67%), Gaps = 16/484 (3%) Strand=Plus/Plus Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCAT 154688 || |||||| |||| || || |||||||||||||| || | |||||| || ||| | Sbjct 158919 CAGCCTAACTCAGGCTCGCAAGGTGAGTATGCAGGGCTCGTTGCAATCAAAAAATATTTT 158978 Query 154689 CAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACT 154748 || | || || | || | ||| | |||||||| || | || ||||| || || Sbjct 158979 GAAAGTCGCGGCGAAAACCAACGCAATATTTGTTTGATTCCTCAATCTGCACACGGCACC 159038 Query 154749 AATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGAT 154808 || || || || |||| ||||| || || | || || |||||||| | Sbjct 159039 AACCCCGCCTCAGCACAAATGGTTTCCATGAAGGTCGTTGTCGTGAACTGTGATGAACAG 159098 Query 154809 GGTAACATAGACATCAAAGATCT---AGAGAAG--AAAGCAATCA---TGAATACATTTG 154860 || ||| | ||| | | ||| | || ||| ||| | | || |||| | ||| Sbjct 159099 GGCAACGTCGACCTAATCGATTTGCAAGCCAAGGTAAACCTA-CACGGTGAAAATATTG- 159156 Query 154861 AACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA 154920 | | || |||||| | || ||||| || || || || || |||||| ||||||| Sbjct 159157 --CCG-CA---ATTATGGTCACCTACCCGTCCACTCACGGGGTTTTTGAAGAAAACATTA 159210 Query 154921 GACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATC 154980 | | || || || | |||| || |||||||||||| ||| | || || || || Sbjct 159211 AAGACATTTGCCAGCTAATTCACAGCATTGGTGGTCAGGTTTATATCGACGGCGCCAACA 159270 Query 154981 TAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAA 155040 | ||||||| ||| || || || ||| | || | ||| | || || | ||| ||| Sbjct 159271 TGAATGCACTGGTTGGCCTCGCTGCACCCGGAGAATTTGGCGGCGACGTGTCTCACTTAA 159330 Query 155041 ACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAG 155100 ||||||| |||||||| ||||||||||| || || || || |||||| | || ||||| | Sbjct 159331 ACTTACACAAAACATTTTGTATTCCACACGGCGGAGGCGGCCCTGGCATGGGCCCTATCG 159390 Query 155101 GTGT 155104 |||| Sbjct 159391 GTGT 159394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211561932640