Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq58 93.3 1e-13 seq72 91.5 3e-13 >seq58 Length=10060 Score = 93.3 bits (102), Expect = 1e-13 Identities = 225/338 (67%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 73708 TGCTTGAGTTTTTGCGTGATTACGGTAAATGCTTCACTGTGAATAATATGATGAACAAAG 73767 |||| || |||||||| ||| || || ||| || | ||||||||||| | |||| Sbjct 6518 TGCTCGATTTTTTGCGCGATGTTGGCAAGCACTTTTCTATCAATAATATGATTCAGAAAG 6459 Query 73768 AATCTGTACGTTCACGTATTGAACGCGATGAACAAGGTATTTCTTTCACTGAATTTTCGT 73827 | || ||| |||||||| || || | ||||||||||||||||| ||| | | Sbjct 6458 AGTCAGTAAAGCAGCGTATTGATCGTGAAGGTGCGGGTATTTCTTTCACTGAGTTTACCT 6399 Query 73828 ATCAAATTCTTCAAGCAATGGACTTTGAATATTTGTACGAAATGAATAACTGCAAAATCC 73887 | ||| | || | ||||||| | ||||| || | | ||||||| | | Sbjct 6398 ACATGATTTTGCAGTCTTACGACTTTGCCGAGCTGTACAAACAGCACAACTGCACTCTGC 6339 Query 73888 AAATTGGTGGTTCTGACCAATGGGGTAATATGATTGCTGGAATTGATTTGATTCATAAAA 73947 ||||||| || || || |||||||| ||||| | || ||||| || ||| || | Sbjct 6338 AAATTGGCGGGTCCGATCAATGGGGCAATATCACTGGCGGAATCGACTTGGCTCGCCGCA 6279 Query 73948 TCCACGGCAATGATGCAGACTGCGGTGTTATCACTATACCACTAGTTACTAAATCTGATG 74007 | | ||| | || | ||| ||| || | || || || || ||||| || | Sbjct 6278 TGTATGGC---GGGCAAGTTTTTGGT-TTA--ACGCTGCCTCTTGTGACCAAATCAGACG 6225 Query 74008 GTACTAAATTTGGTAAATCAGAATCTGGTACTATCTGG 74045 | ||||| ||||||||| | ||||| || || |||||| Sbjct 6224 GCACTAAGTTTGGTAAAACCGAATCGGGAACCATCTGG 6187 >seq72 Length=394956 Score = 91.5 bits (100), Expect = 3e-13 Identities = 263/400 (66%), Gaps = 16/400 (4%) Strand=Plus/Plus Query 150404 GGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAAT 150463 || || || || ||||| ||||| ||| ||||| || ||||| || ||||| |||| Sbjct 385062 GGCGAGCCCGGCGTTGGGAAAACGGCAATTGTTGAAGGTTTAGCGCAGCGCATAATTAAT 385121 Query 150464 GGTGATGTTCCAGATTCTATGAAAGATGTTGAAA----TTCTTTCTTTGAATATGGGTGC 150519 || || || ||||| |||| || ||| || | || | || | || | Sbjct 385122 GGGGAAGTCCCAGAAGGCTTGAAGAAT----AAACGGCTTTTATCGCTCGATTTTGGCTC 385177 Query 150520 ATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACA 150579 | || ||||| | || | ||| || || || ||||||||| || | | || Sbjct 385178 ACTTTTGGCTGGAGCAAAATTTCGCGGAGAGTTTGAAGAACGTTTAAAAGCGGTACTGAC 385237 Query 150580 AGAACTAAAAGAACGCGATGATG---TTATTCTGTTCATCGATGAAATCCATACTATTAT 150636 ||| ||| ||| || | || | |||||||| ||||||||| | || || || | Sbjct 385238 AGAGCTAGGTAAACAGGAAGGTGGAATCATTCTGTTTATCGATGAATTGCACACCATGGT 385297 Query 150637 GGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCT 150696 ||||| ||| | | |||| | |||| | |||||| |||| ||||| || Sbjct 385298 TGGTGCCGGTAAAGCCGAAGGCG---CGATGGACGCCGGTAATATGCTAAAGCCTGCCCT 385354 Query 150697 ATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACAT 150756 | | || || || | | | | | ||||||||||||| || |||||||| || | || Sbjct 385355 AGCGCGAGGCGAGCTACATTGCGTTGGTGCAACAACCTTAGACGAATATCGAAAGTATAT 385414 Query 150757 TGAAAAAGATGCAGCACTACAGCGTCG-TTTCATGAAGGT 150795 |||||||||||| || || |||| || ||||| |||||| Sbjct 385415 TGAAAAAGATGCCGCCTTAGAGCGACGCTTTCA-GAAGGT 385453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147587885701158