Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 >seq13 Length=70205 Score = 95.1 bits (104), Expect = 1e-14 Identities = 232/348 (67%), Gaps = 14/348 (4%) Strand=Plus/Plus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||| |||||||| || ||||| ||||| | |||||||| | ||||| || Sbjct 49279 TTTGTTGAGATGTTCGTCGGTGTTGGTGCTTCGCGTGTTCGCGACATGTTTGA----GCA 49334 Query 175456 CGCGAAAAT-CA---ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCA 175511 ||||||| || ||| ||||| | || || ||||| || ||||| || ||| || Sbjct 49335 AGCGAAAAAGCAGGCACCCTGTATAATTTTTATCGATGAAATCGATGCTGTTGGCCGCCA 49394 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 ||| ||| ||| | | | |||||| | || |||||| | ||||| | | Sbjct 49395 TCGCGGCGGCGGTCATGGTGGTGGTCACGACGAGCGTGAGCAAACACTGAATCAGTTGTT 49454 Query 175572 CACCGAGATGGATGGCTTTGA---CAATGAGACTGGCATTGTGGTTATTGCGGCCACTAA 175628 |||||||||||||||||| |||||| ||| || | |||||||| |||||||| Sbjct 49455 GGTCGAGATGGATGGCTTTGAAGGCAATGA---AGGCGTTATCGTTATTGCCGCCACTAA 49511 Query 175629 TCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGATCCA 175688 ||| || | ||||| ||| || | || || ||||| || ||||| || | Sbjct 49512 CCGCCCCGACGTACTTGACCGCGCACTTTTGCGTCCAGGTCGATTCGATCGTCAGGTGTT 49571 Query 175689 AGTGGGTCTTCCAAGTGTGCGAGGTCGCAAGAAGATTTTGGGAGTCCA 175736 || || || || | | || |||||| || | |||||| ||||| Sbjct 49572 TGTAGGGCTGCCTGATATTCGTGGTCGCGAGCAAATTTTGAAGGTCCA 49619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568324832480