Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13 104 2e-16 >seq13 Length=70205 Score = 104 bits (114), Expect = 2e-16 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT-T 282393 ||||| | ||| || || ||||| ||||| ||||| || || ||||| | | ||||| | Sbjct 22635 TTATCCATACCGTAGGCCAAAGCCGCAGCCGTTGGCTCGTTGATAATACGCTTAACATCT 22576 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||| ||||| || | || ||||||||||| || || | || ||||| ||||| || || Sbjct 22575 AAG-CCAGCGATCTTGCCAGCATCTTTAGTTGCCTGACGCTGCGAATCATTAAAGTAAGC 22517 Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 || || |||||||| || || ||||| ||| |||| |||| | || || | || Sbjct 22516 CGGTACGGTAATAACCGCTTCCGTTACCGCTTCACCAAGATAATCTTCAGCGGTCTTCTT 22457 Query 282514 CATTTT 282519 |||||| Sbjct 22456 CATTTT 22451 Score = 91.5 bits (100), Expect = 1e-12 Identities = 200/296 (68%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 |||||| | |||||| |||||||| | ||| || || ||||||||||| || | || | Sbjct 23545 CACATTCAAAATACCGTTGGCATCAATATCGAAGGTCACTTCAATTTGTGGCATGCCGCG 23486 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 | | || ||||| || | |||| | ||| ||||| | || || | ||| Sbjct 23485 CGGCGCGGGTGGAATATCAGCCAAGTCAAAACGTCCCAAAGATTTGTTTTGGCTAGCTTG 23426 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 || || ||||||| | | || ||||| || |||||||||| || | || | Sbjct 23425 CTTACGCTCACCCTGAACTACGTGAATAGTTACCGCAGTTTGATTGTCGTCAGCGGTCGA 23366 Query 281611 AAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 281669 |||||| ||| ||||||||| || || || ||||| | || || | | ||| || Sbjct 23365 AAATAC-CTGTGATTTTTTAGTCGGGATGGTCGTGTTCTTCTCGATCAAAGCCGTCGCAA 23307 Query 281670 TACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 281725 ||||||||| ||||| | ||| || | || || | ||||||| ||| ||||| Sbjct 23306 CACCACCAGCAGTTTCAATACCGAGGGTTAGCGGGCTCACATCAAGTAG--CAATA 23253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740622004622646