Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 5e-11 >seq14 Length=138344 Score = 84.2 bits (92), Expect = 5e-11 Identities = 211/317 (67%), Gaps = 9/317 (3%) Strand=Plus/Minus Query 257186 GGCTATAAGCAAGTAGGTAAGGATTTCCCAGTATATCTAAGTCCAGAAGGTAATGAACA- 257244 |||| | ||||||| || || || ||||| || | || ||| ||| || ||| | Sbjct 39874 GGCTTTCAGCAAGTCGGCAAAGACTTCCCCGTGTTCCTCCATCCTGAAACAAAAGAAGAG 39815 Query 257245 --CGCATTAGCCCGTACTGAGCGTAAAACTGGTACTGGATATGGTGGCTTTGAAGTGGAT 257302 ||| | || || | ||||| ||||| || | ||| || ||||| ||| | ||| Sbjct 39814 TACGCGCTCGCGCGCAAAGAGCGGAAAACGGGCAGTGGTTACACCGGCTTCGAATTCGAT 39755 Query 257303 ACAAAAGGC---GTAACACTAGAACAAGATTTGTATCGCCGTGACCTTACAATTAATGCA 257359 || || | || | | ||| | ||||| | || || || | || ||||| ||| Sbjct 39754 ACCCAAAGTACTGTTAGCTTGGAAGACGATTTATTGCGTCGCGATTTGACCATTAACGCA 39695 Query 257360 ATTGCGTATGATCCAGTACTACAAATTCACATCGATCCATACGGTGGTAAAGCTGATATC 257419 ||||| | || ||| ||||| | ||||| || ||||||||| ||||||||| Sbjct 39694 ATTGCCAAGGA--CAGCCAAGGAAATTTA-ATCGACCCCTACGGTGGTGTTGCTGATATC 39638 Query 257420 AAGAACAAGATACTACGTCATGTTTCTGACCATTTTAAAGAAGATCCATTACGCGTGTTA 257479 || || ||||| |||||||| || ||| ||| ||||| || ||||||| || Sbjct 39637 AAAGCAAAAATACTTCGTCATGTATCCGACGCTTTCGCTGAAGACCCCGTACGCGTTTTG 39578 Query 257480 CGTCTTGCTCGATTTGC 257496 || |||| || ||||| Sbjct 39577 CGAATTGCCCGCTTTGC 39561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115168756729599