Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq64 122 2e-23 seq18 96.9 8e-16 >seq64 Length=206549 Score = 122 bits (134), Expect = 2e-23 Identities = 127/162 (78%), Gaps = 5/162 (3%) Strand=Plus/Minus Query 24389 CCTTTAAGTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTT-AAATTACCGTGTC 24447 |||| | |||||| || ||| || | ||| |||||| |||||||| ||||| ||||| Sbjct 47555 CCTTAATGTGTAGTAGCTCAGACTTGATCGGACAGTTACCCGTTTTTAAATTG--GTGTC 47498 Query 24448 TGTCAGATTA-ATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAG 24506 ||| || ||| || | |||| ||||| || | ||| |||| ||||||||| ||||| Sbjct 47497 TGTTAGTTTAGATCTAAGCT-AAATTTTTCTTAGCCCCAATCGATTTTCCATCCAGTAAA 47439 Query 24507 GTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGT 24548 || ||||||| ||||||||||| ||||||||||| |||||| Sbjct 47438 GTGTCCATCGGCGTTCTGCCACAACACATTTTTCCCTGATGT 47397 >seq18 Length=118414 Score = 96.9 bits (106), Expect = 8e-16 Identities = 90/112 (80%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 24443 GTGTCTGTCAGATT-AATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAA 24501 ||||||||||| || |||||||| |||||| ||||| |||||||| || | |||| Sbjct 113581 GTGTCTGTCAGTTTGTATTTGAGC-TAAATTTTTTTCAGCCCAAATCGACTTACTATCAC 113639 Query 24502 GTAAGGTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCG 24553 |||| ||| |||| || |||||||||||||||||| ||||| |||| ||| Sbjct 113640 GTAAAGTTTCCATTGGCGTTCTGCCACAGCACATTCACCCTTGCTGTGCTCG 113691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114322967852452