Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bankia_20setacea_20[genbank_20GCA_5F001922985.1_202016-12-28] 171 sequences; 3,867,604 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq64 116 1e-21 seq18 96.9 1e-15 >seq64 Length=206549 Score = 116 bits (128), Expect = 1e-21 Identities = 123/157 (78%), Gaps = 5/157 (3%) Strand=Plus/Minus Query 40661 ATTTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTT-AAATTACCGTGTCTGTCA 40719 || ||||| || ||| || | ||| |||||| |||||||| ||||| |||||||| | Sbjct 47550 ATGTGTAGTAGCTCAGACTTGATCGGACAGTTACCCGTTTTTAAATTG--GTGTCTGTTA 47493 Query 40720 GATTA-ATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGC 40778 | ||| || | |||| ||||| || | ||| |||| ||||||||| ||||| || | Sbjct 47492 GTTTAGATCTAAGCT-AAATTTTTCTTAGCCCCAATCGATTTTCCATCCAGTAAAGTGTC 47434 Query 40779 CATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGT 40815 |||||| ||||||||||| ||||||||||| |||||| Sbjct 47433 CATCGGCGTTCTGCCACAACACATTTTTCCCTGATGT 47397 >seq18 Length=118414 Score = 96.9 bits (106), Expect = 1e-15 Identities = 90/112 (80%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 40710 GTGTCTGTCAGATT-AATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAA 40768 ||||||||||| || |||||||| |||||| ||||| |||||||| || | |||| Sbjct 113581 GTGTCTGTCAGTTTGTATTTGAGC-TAAATTTTTTTCAGCCCAAATCGACTTACTATCAC 113639 Query 40769 GTAAGGTTGCCATCGGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCG 40820 |||| ||| |||| || |||||||||||||||||| ||||| |||| ||| Sbjct 113640 GTAAAGTTTCCATTGGCGTTCTGCCACAGCACATTCACCCTTGCTGTGCTCG 113691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166722861447702