Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq45842 118 1e-21 seq63864 82.4 7e-11 >seq45842 Length=221613 Score = 118 bits (130), Expect = 1e-21 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAG 12073 || || ||||||||||| |||||||||| ||||||||| || || |||||| ||| || Sbjct 81554 AAGTTTTCATTTACAATTCCATCACTAGCTGCAAAAAAGGCAAGAATATGTGATATGAAA 81613 Query 12074 TAT---TTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACT 12130 | | | ||| |||| | | || ||||||| ||||||||||||| ||||| ||| Sbjct 81614 TGTCGCTCTTCATCTT---TCAGGTTTTCCCAATGCCCTAAATCTTTTGACAAATCAACT 81670 Query 12131 TCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATAC 12190 || || | ||||| || || ||| || || ||||| | |||||| ||||| ||| Sbjct 81671 TCCTCTGCAGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCTGCCAGATGTCATGGTAC 81730 Query 12191 TTAATAGGGAAAATAACGAA 12210 | ||| ||||| | ||| || Sbjct 81731 TGAATGGGGAAGACAACAAA 81750 >seq63864 Length=1411193 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 ||| |||||||| ||| |||| | | ||| ||| ||| | ||||| |||| ||| Sbjct 1069229 TCCAGGACATTCATGTGGGCACAGCAAGGTCCACTCTCCATTGCTCTCTACACGTTTCAT 1069288 Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 || || || || | ||| | ||| || | ||| ||| |||| ||||||| || || Sbjct 1069289 GAACAAGTCTGGAATCCACATAGCATAGAACAGATCCCTGGCTCTAGATTCTTCTTTACC 1069348 Query 38088 TACATTCTTTCTTA-AGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAA 38146 | || |||||| || || ||||| ||||||||||| ||||||||||| | || | Sbjct 1069349 TGTGTT-TTTCTTGCAGTCTAAGAAATCAAATATATCAGCATGCCATGGTTCCAGGTACA 1069407 Query 38147 TCGACATTGCTCCTGGTCT 38165 | | | || |||||||| Sbjct 1069408 TAGCAAAAGCCCCTGGTCT 1069426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468140246557280