Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq17713 86.0 7e-12 >seq17713 Length=1813327 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TAT 7121 |||||||| |||| ||| | ||||||||| |||| || ||||| || ||| |||| ||| Sbjct 1565442 GGATTCCATGCAGACATGATAATACGTCTGTCATCAGGGTTTGTCTT-AATCTTGTGTAT 1565500 Query 7122 AATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATT 7181 || ||| || || || |||| || ||| | || ||| || | |||| | Sbjct 1565501 AACGTCAGCTAACTGGTCAATTCCCTTTCCGGTATAGTCAGCATGCATATCTTTATATTC 1565560 Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 || |||||||||||||| || || ||||| | ||||||||||| ||| Sbjct 1565561 TGCCCCAAAATGTCTCCACTGGAAGCCATACACTGGACCTAAATCTCCT 1565609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595382923159200