Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04-
05] 65,662 sequences; 1,658,191,953 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq13065 87.8 2e-12
>seq13065
Length=295510
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
|| ||||| || ||||| | || || ||||| ||||||||||| || || || |||
Sbjct 164079 AAACGCAAGACTAAATGGAGGGTTGATTCTTTCTGAATATTGTAGTCTGACAAAGTACGA 164020
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
||| || || ||||| || || |||| | || |||||||| || || || || |||
Sbjct 164019 CCATCTTCAAGTTGTTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCC 163960
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
|||||| ||| || ||| | | ||| | |||||| | || || || | ||
Sbjct 163959 TTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCTGATGGTTCAACCTCAAGTGTA 163900
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || || || || || ||||| || ||||| |||||
Sbjct 163899 ATTGTCTTTCCAGTAAGTGTTTTCACGAAAATTTGCAT 163862
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
|| ||||| || ||||| | || || ||||| ||||||||||| || || || ||
Sbjct 163851 AAACGCAAGACTAAATGGAGGGTTGATTCTTTCTGAATATTGTAGTCTGACAAAGTACGG 163792
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
||| || || || || || || |||| | || |||||||| || || || || ||
Sbjct 163791 CCATCTTCAAGTTGCTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCT 163732
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
||||| |||||| ||| | | ||| | |||||| | | || || || | ||
Sbjct 163731 TTGTCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCTGAAGGTTCAACCTCCAAAGTG 163672
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || || || || || ||||| ||||| ||||||||
Sbjct 163671 ATGGTCTTTCCTGTGAGTGTTTTCACAAAGATCTGCAT 163634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475110520830880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |