Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq63207 91.5 1e-13 >seq63207 Length=555540 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || || ||||| || || ||||| || || |||| || ||| || Sbjct 321776 ACAAGATGAAGTGTCGACTCCTTCTGAATGTTATAGTCTGAGAGGGTTCTACCATCTTCA 321835 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||| || ||| | ||||||| |||||| || || || || ||||||||||||||| Sbjct 321836 AGTTGTTTACCAGCGAAAATCAATCTTTGCTGATCTGGTGGGATTCCTTCTTTATCTTGA 321895 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 | || ||||| ||| | | ||| || | || || || || || | ||||| Sbjct 321896 AGCTTAGATTTGACATTTTCAATTGCGTCTGATGGTTCTACCTCAAGTGTGATAGTTTTA 321955 Query 45312 CCGGT 45316 ||||| Sbjct 321956 CCGGT 321960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451632207073520