Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq63207 109 4e-19 seq4946 87.8 1e-12 >seq63207 Length=555540 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||| | | | ||| || | |||||| || || || || || || || || || | | Sbjct 321758 CCTCCTGTAAGATGTAGTACAAGATGAAGTGTCGACTCCTTCTGAATGTTATAGTCTGAG 321817 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || | ||| ||||| || || ||||| | || ||||| || || Sbjct 321818 AGGGTTCTACCATCTTCAAGTTGTTTACCAGCGAAAATCAATCTTTGCTGATCTGGTGGG 321877 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||||| || ||| ||| |||| | | ||| || | ||| || Sbjct 321878 ATTCCTTCTTTATCTTGAAGCTTAGATTTGACATTTTCAATTGCGTCTGATGGTTCTACC 321937 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||||| |||| ||||| ||||| || ||| Sbjct 321938 TCAAGTGTGATAGTTTTACCGGTCAACGTT 321967 >seq4946 Length=1295357 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| || || || || ||||| |||| | |||||| |||| ||||| || Sbjct 125819 ATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTTCTGCCATCTTCCAACTG 125760 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCT 101368 ||||| ||||| ||||| | |||||| || || ||||| ||| Sbjct 125759 TTTACCAGCAAAGATCAATCTCTGTTGGTCAGGGGGAATTCCT 125717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395961275981334