Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04-
05] 65,662 sequences; 1,658,191,953 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq63207 104 2e-17
>seq63207
Length=555540
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| |||||||| ||| | | |||| || ||||| || || |||||
Sbjct 322036 CTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTACCATCTTCAAGTTGTTTACCAGCGAA 322095
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || |||||| ||| | || | || || ||||| | || || ||||||
Sbjct 322096 AATCAATCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATT 322155
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| | || || || | || ||||| || || || |||||||||||
Sbjct 322156 TTCGATGGTATCAGAAGGTTCCACCTCTAAAGTGATGGTTTTACCAGTAAGGGTCTTTAC 322215
Query 34966 AAAGATCTGCAT 34977
||||||||||||
Sbjct 322216 AAAGATCTGCAT 322227
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || ||| | | |||| || ||||| || || |||||
Sbjct 379381 CTCCTTCTGAATGTTGTAGTCTGAGAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 379440
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || |||||| ||| | || | || || ||||| | || || ||||||
Sbjct 379441 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATT 379500
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| | || || || | || ||||| || || || |||||||||||
Sbjct 379501 TTCGATGGTATCAGAAGGTTCCACCTCCAAAGTGATGGTTTTACCAGTAAGGGTCTTTAC 379560
Query 34966 AAAGATCTGCAT 34977
||||||||||||
Sbjct 379561 AAAGATCTGCAT 379572
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||||||||| || ||| | | |||| || ||||| || || |||||
Sbjct 379153 CTCCTTCTGAATGTTATAGTCTGAGAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 379212
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || |||||| ||| | || | || || ||||| | || || |||||||
Sbjct 379213 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTT 379272
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || || || | || || |||| || || || || || || | || || ||
Sbjct 379273 TTCAATTGAGTCTGATGGTTCTACCTCAAGTGTGATAGTTTTACCGGTCAAAGTTTTGAC 379332
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 379333 AAATATTTGCAT 379344
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806
|||||| || | || | ||| || || |||| || |||||||||||||||||||||
Sbjct 378658 ATTTCCACCACGTAAACGCAGTACAAGATGAAGTGTTGACTCCTTCTGAATGTTATAGTC 378717
Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866
|| ||| | | |||| || ||||| || || || || |||| || |||||| ||| |
Sbjct 378718 TGAGAGGGTCCTTCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGG 378777
Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926
|| | || || ||||| | || || ||||||| | | || | || | ||
Sbjct 378778 TGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCAATTGTGTCTGATGGTTC 378837
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||| || || || || || || | || || ||||| || |||||
Sbjct 378838 TACCTCAAGTGTGATAGTTTTACCTGTCAAAGTTTTGACAAATATTTGCAT 378888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325432162504778
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |