Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq63207 104 2e-17 >seq63207 Length=555540 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| |||||||| ||| | | |||| || ||||| || || ||||| Sbjct 322036 CTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTACCATCTTCAAGTTGTTTACCAGCGAA 322095 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||| ||| | || | || || ||||| | || || |||||| Sbjct 322096 AATCAATCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATT 322155 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | || || || | || ||||| || || || ||||||||||| Sbjct 322156 TTCGATGGTATCAGAAGGTTCCACCTCTAAAGTGATGGTTTTACCAGTAAGGGTCTTTAC 322215 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 322216 AAAGATCTGCAT 322227 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || ||| | | |||| || ||||| || || ||||| Sbjct 379381 CTCCTTCTGAATGTTGTAGTCTGAGAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 379440 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||| ||| | || | || || ||||| | || || |||||| Sbjct 379441 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATT 379500 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | || || || | || ||||| || || || ||||||||||| Sbjct 379501 TTCGATGGTATCAGAAGGTTCCACCTCCAAAGTGATGGTTTTACCAGTAAGGGTCTTTAC 379560 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 379561 AAAGATCTGCAT 379572 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| || ||| | | |||| || ||||| || || ||||| Sbjct 379153 CTCCTTCTGAATGTTATAGTCTGAGAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 379212 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || |||||| ||| | || | || || ||||| | || || ||||||| Sbjct 379213 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTT 379272 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || || || | || || |||| || || || || || || | || || || Sbjct 379273 TTCAATTGAGTCTGATGGTTCTACCTCAAGTGTGATAGTTTTACCGGTCAAAGTTTTGAC 379332 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 379333 AAATATTTGCAT 379344 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 |||||| || | || | ||| || || |||| || ||||||||||||||||||||| Sbjct 378658 ATTTCCACCACGTAAACGCAGTACAAGATGAAGTGTTGACTCCTTCTGAATGTTATAGTC 378717 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 || ||| | | |||| || ||||| || || || || |||| || |||||| ||| | Sbjct 378718 TGAGAGGGTCCTTCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGG 378777 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | || || ||||| | || || ||||||| | | || | || | || Sbjct 378778 TGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCAATTGTGTCTGATGGTTC 378837 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| || || || || || || | || || ||||| || ||||| Sbjct 378838 TACCTCAAGTGTGATAGTTTTACCTGTCAAAGTTTTGACAAATATTTGCAT 378888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325432162504778