Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13065 82.4 7e-11 >seq13065 Length=295510 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| |||||||| || || || ||| | || || || Sbjct 164067 AAATGGAGGGTTGATTCTTTCTGAATATTGTAGTCTGACAAAGTACGACCA-TCTTCAAG 164009 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || || | ||||| || ||||| || || || || ||||||||||| ||| Sbjct 164008 TTGTTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGAT 163949 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||| | || || || || | || | || || || Sbjct 163948 CTTAGCCTTTACATTTTCAATGGTGTCTGATGGTTCAACCTCAAGTGTAATTGTCTTTCC 163889 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| ||||| Sbjct 163888 AGTAAGTGTTTTCACGAAAATTTGCAT 163862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483024020292880