Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq63864 102 2e-16 >seq63864 Length=1411193 Score = 102 bits (112), Expect = 2e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||| || || ||||| |||||| | ||||||||||| |||||||| || | || Sbjct 1069414 TTTGCTATGTACCTGGAACCATGGCATGCTGATATATTTGATTTCTTAGA-CTGCAAGAA 1069356 Query 110817 AATCA-AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 || || ||| |||||| ||||| | ||| | || ||||| ||||||||| |||| Sbjct 1069355 AAACACAGGTAAAGAAGAATCTAGAGCCAGGGATCTGTTCTATGCTATGTGGATTCCAGA 1069296 Query 110876 TTTATTCATGAAACGTGT 110893 || |||||||||||||| Sbjct 1069295 CTTGTTCATGAAACGTGT 1069278 Score = 91.5 bits (100), Expect = 3e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 110987 ATATGAAAAAGA-AGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045 |||||||||||| | || | || ||| |||| ||||||| | | |||| | | Sbjct 1068042 ATATGAAAAAGAGAAGCGCGGA-CGTAAAACAATTAAAGCTCAACAGTTATGGTACGCCA 1067984 Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 | ||||||||||| |||||||| |||||||| || || || |||||||| ||| | Sbjct 1067983 TTATTGAATCACAAACAGAAACTGGTACTCCTTACATGTTATACAAAGATCACTGTAACC 1067924 Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154 |||| || |||||| ||| | ||||| ||||| | |||||| |||| Sbjct 1067923 GCAAGTCAAATCAACAAAATCTGGGAACCATTAAATGTAGTAACCTGTG 1067875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185814341067182