Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq57423 87.8 6e-14 seq55609 87.8 6e-14 seq52540 87.8 6e-14 seq35788 87.8 6e-14 >seq57423 Length=238453 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 1045 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 1102 >seq55609 Length=5607 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 2766 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 2709 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 5306 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 5249 >seq52540 Length=753 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 84 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 27 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 664 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 607 >seq35788 Length=1264 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 121 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 178 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| Sbjct 702 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGCCCCCGGTTCAATCCCGGG 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15838217163990