Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq63207 96.9 3e-15 >seq63207 Length=555540 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||||||||||||||| | || || | ||| | || |||||| |||||||| || || Sbjct 378658 ATTTCCACCACGTAAACGCAGTACAAGATGAAGTGTTGACTCCTTCTGAATGTTATAGTC 378717 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 | | ||| | | || || || || ||||| ||||| ||||| | ||||| || | Sbjct 378718 TGAGAGGGTCCTTCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGG 378777 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTC 35685 |||| | || ||||| ||||| || | || | | ||||| | ||| Sbjct 378778 TGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCAATTGTGTCTGATGGTTC 378837 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct 378838 TACCTCAAGTGTGATAGTTTTACCTGTCAAAGTTTTGACAAATATTTGCAT 378888 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | |||| | || || || || ||||| || || Sbjct 378925 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 378984 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||||| || | ||||| | || ||||| ||||| || | | Sbjct 378985 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACGTT 379044 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| ||||| | ||||| |||||||| ||||||||||| || Sbjct 379045 TTCAATTGTGTCTGATGGTTCTACCTCAAGTGTGATAGTTTTACCGGTCAAAGTTTTGAC 379104 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 379105 AAATATTTGCAT 379116 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||||| | || || || || ||||| || || Sbjct 379381 CTCCTTCTGAATGTTGTAGTCTGAGAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 379440 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||||| || | ||||| | || ||||| ||||| || | | | Sbjct 379441 AATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATT 379500 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | ||||||||||| ||||| |||||||| || | || || || Sbjct 379501 TTCGATGGTATCAGAAGGTTCCACCTCCAAAGTGATGGTTTTACCAGTAAGGGTCTTTAC 379560 Query 35725 AAATATCTGCATT 35737 ||| ||||||||| Sbjct 379561 AAAGATCTGCATT 379573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450423599882960