Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq45842 122 7e-23 >seq45842 Length=221613 Score = 122 bits (134), Expect = 7e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| || || || ||||| || |||||||| ||||| |||||||| |||||| | || Sbjct 81750 TTTGTTGTCTTCCCCATTCAGTACCATGACATCTGGCAGATGTACAAGAAAGCAGAAGCC 81691 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || || ||||| ||||| |||||||||||| | ||||| |||| |||||| | Sbjct 81690 TCCTTCTGGACTGCAGAGGAAGTTGATTTGTCAAAAGATTTAGGGCATTGGGAAAACCTG 81631 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 ||| |||| |||||| ||||| || | || |||||||| || || || || Sbjct 81630 AAAGATGAAGAGCGACATTTCATATCACATATTCTTGCCTTTTTTGCAGCTAGTGATGGA 81571 Query 43880 ATAGTCAATGAAAATTTGGT 43899 || || |||||||| ||||| Sbjct 81570 ATTGTAAATGAAAACTTGGT 81551 Score = 93.3 bits (102), Expect = 3e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 43929 CAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGT 43988 ||||||| ||||||||||||| || || |||||||| || || |||||||| ||||||| Sbjct 81031 CAGAAGCCAGATGTTTTTATGGTTTCCAGATTGCCATGGAGAACATTCATTCTGAAATGT 80972 Query 43989 ACAGTCTTCTGATAGATACGTACATCAAAGA 44019 | || | || || ||||| ||||||||||| Sbjct 80971 ATAGCTTACTCATTGATACCTACATCAAAGA 80941 Score = 86.0 bits (94), Expect = 5e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 44488 TGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTT 44547 |||| |||| || ||||| || |||||| | || || || ||||| || ||||||||||| Sbjct 76901 TGTAGAAAATCCTTTTGACTTCATGGAACAGATATCATTAGAAGGAAAGACAAACTTTTT 76842 Query 44548 TGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 ||| || | ||||||||||||||| ||||| || ||| Sbjct 76841 TGAGAAGAGAGTTGGAGAATATCAGAAGATGGGTGTAATG 76802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397137933600310