Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq63207 82.4 5e-11 >seq63207 Length=555540 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 |||||||| ||||| |||||| | || || ||| ||| ||| |||| || ||| | || Sbjct 378888 ATGCAAATATTTGTCAAAACTTTGACAGGTAAAACTATCACACTTGAGGTAGAACCATCA 378829 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | || |||||| || || ||||||||||| |||| || | Sbjct 378828 GACACAATTGAAAAC--GTCAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATC 378771 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| | || |||||||| || |||||| | || || | | | | | | || || || | Sbjct 378770 AGCAAAGATTGATTTTTGCTGGTAAACAACTTGAAGATGGAAGGACCCTCTCAGACTATA 378711 Query 27968 ACATCCAAAAAGAG--AGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| || || ||| | ||||| ||| | || ||||||| ||||| || Sbjct 378710 ACATTCAGAAGGAGTCAACACTT--CATCTTGTACTGCGTTTACGTGGTGG 378662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355577619112674