Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq45842 127 2e-24 >seq45842 Length=221613 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| |||||||| ||||| || || ||||| ||||||||||| || | || ||| ||||| Sbjct 81550 TACCAAGTTTTCATTTACAATTCCATCACTAGCTGCAAAAAAGGCAAGAATATGTGATAT 81609 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 || | | || ||| || || |||| ||| || |||||||| | |||||||| Sbjct 81610 GAAATGTCGCTCTTCATCTTTCAGGTTTTCCCAATGCCCTAAATCTTTTGACAAATCAAC 81669 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||| || ||||||| || || ||||| ||||| |||||||| ||| || ||| | || Sbjct 81670 TTCCTCTGCAGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCTGCCAGATGTCATGGTA 81729 Query 5111 CTGAATCGGAAGTATGACAAATC 5133 |||||| || | | ||||||| Sbjct 81730 CTGAATGGGGAAGACAACAAATC 81752 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867 ||| |||| || || || || || |||| |||||||||||||||||| || || || || Sbjct 80937 TGGTTCTTTGATGTAGGTATCAATGAGTAAGCTATACATTTCAGAATGAATGTTCTCCAT 80996 Query 4868 AGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918 |||||||| || || ||||| ||||| |||||||| | || ||||| || Sbjct 80997 GGCAATCTGGAAACCATAAAAACATCTGGCTTCTGTAGCCTGTACTTCCTT 81047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426707851155446