Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq63207 141 2e-28 seq13065 131 4e-25 seq57759 95.1 3e-14 seq63522 89.7 1e-12 seq61240 89.7 1e-12 seq55995 89.7 1e-12 seq33089 89.7 1e-12 seq14972 89.7 1e-12 seq11408 89.7 1e-12 seq60785 86.0 1e-11 seq58119 86.0 1e-11 seq51393 86.0 1e-11 >seq63207 Length=555540 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || ||||| ||||| | || || || || ||||||||||||| ||||| | Sbjct 378899 AGACGGAGTACAAGATGAAGTGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCTT 378958 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || |||||||| || || || ||||| | ||| || || ||||| || || Sbjct 378959 CCATCTTCAAGTTGTTTACCAGCGAAAATCAATCTTTGCTGATCTGGAGGAATTCCTTCT 379018 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||| ||||| ||||| ||| | || || ||||| || | ||| || || || ||| Sbjct 379019 TTGTCTTGAATCTTGGCTTTGACGTTTTCAATTGTGTCTGATGGTTCTACCTCAAGTGTG 379078 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| || || ||||| ||||| Sbjct 379079 ATAGTTTTACCGGTCAAAGTTTTGACAAATATTTGCAT 379116 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || ||||| ||||| | || || ||||| ||||||||||| | || || | Sbjct 322010 AGACGGAGTACAAGATGAAGTGTTGACTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTA 322069 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || |||||||| || || || ||||| | ||| || || ||||| || || Sbjct 322070 CCATCTTCAAGTTGTTTACCAGCGAAAATCAATCTTTGCTGATCTGGTGGAATTCCTTCT 322129 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||| ||||| ||||| || | ||||| || || |||| ||| || || | |||| Sbjct 322130 TTGTCTTGAATCTTGGCTTTGACATTTTCGATGGTATCAGAAGGTTCCACCTCTAAAGTG 322189 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || | ||||| || || |||||||| Sbjct 322190 ATGGTTTTACCAGTAAGGGTCTTTACAAAGATCTGCAT 322227 Score = 125 bits (138), Expect = 1e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || ||||| ||||| | || || || || ||||||||||| | || || | Sbjct 379355 AGACGGAGTACAAGATGAAGTGTCGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTTCTT 379414 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || |||||||| || || || ||||| | ||| || || ||||| || || Sbjct 379415 CCATCTTCAAGTTGTTTACCAGCGAAAATCAATCTTTGCTGATCTGGAGGAATTCCTTCT 379474 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||| ||||| ||||| || | ||||| || || |||| ||| || || | |||| Sbjct 379475 TTGTCTTGAATCTTGGCTTTGACATTTTCGATGGTATCAGAAGGTTCCACCTCCAAAGTG 379534 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||| || | ||||| || || ||||||||| || Sbjct 379535 ATGGTTTTACCAGTAAGGGTCTTTACAAAGATCTGCATTGTC 379576 >seq13065 Length=295510 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| || || |||||||| | | || |||||||| || ||||| || |||||||| Sbjct 163825 TTCTTTCTGAATATTGTAGTCTGACAAAGTACGGCCATCTTCAAGTTGCTTACCGGCAAA 163766 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | |||||| || || ||||| || || ||||||||||| || || ||||| | Sbjct 163765 GATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTTACATT 163706 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||| || || | |||||| ||||| || || | || || || Sbjct 163705 TTCAATGGTGTCTGAAGGTTCAACCTCCAAAGTGATGGTCTTTCCTGTGAGTGTTTTCAC 163646 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 163645 AAAGATCTGCAT 163634 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| || ||||||||||| | | || |||||||| || |||||||| |||||||| Sbjct 164281 TTCTTTCTGAATGTTGTAGTCTGACAAAGTACGGCCATCTTCAAGTTGTTTACCGGCAAA 164222 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | |||||| || || ||||| || || ||||| |||||||| || ||||| | Sbjct 164221 GATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGGATCTTAGCCTTTACATT 164162 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||| || || || || || ||||| || || | || || || Sbjct 164161 TTCAATGGTGTCTGATGGTTCAACCTCAAGTGTAATTGTCTTTCCAGTAAGTGTTTTCAC 164102 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 164101 GAAAATTTGCAT 164090 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| || || |||||||| | | || || ||||| || |||||||| |||||||| Sbjct 164053 TTCTTTCTGAATATTGTAGTCTGACAAAGTACGACCATCTTCAAGTTGTTTACCGGCAAA 163994 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | |||||| || || ||||| || |||||||| |||||||| || ||||| | Sbjct 163993 GATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATT 163934 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||| || || || || || ||||| || || | || || || Sbjct 163933 TTCAATGGTGTCTGATGGTTCAACCTCAAGTGTAATTGTCTTTCCAGTAAGTGTTTTCAC 163874 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 163873 GAAAATTTGCAT 163862 >seq57759 Length=555176 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTT 283053 |||||||||||||||||||||| || || || | || || ||||| |||| ||||||| Sbjct 200314 TACCCTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCAGAAGGCTCGACTT 200373 Query 283054 CGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA----TATAC 283109 | || || || || || || ||||| ||||| || || |||||||| || | | ||| Sbjct 200374 CTAGTGTAATGGTTTTCCCAGTCAATGTCTTTACAAAGATCTGCATCTTGACAGTTCTAC 200433 Query 283110 AAATA 283114 ||||| Sbjct 200434 AAATA 200438 >seq63522 Length=3463 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 690 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 746 >seq61240 Length=1860 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 765 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 821 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1639 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1695 >seq55995 Length=98891 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 5003 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 5059 >seq33089 Length=5378 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 601 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 657 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1462 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1518 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 4681 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 4737 >seq14972 Length=104360 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 97795 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 97739 >seq11408 Length=986 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 49 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 105 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 922 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 978 >seq60785 Length=27705 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 9717 TAGTATAGTAGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 9661 >seq58119 Length=236802 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||| ||| Sbjct 64386 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCTCCG 64442 >seq51393 Length=190741 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||| Sbjct 13081 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAATCCCCG 13137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045858584198948