Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq13065 100 2e-16 seq63207 91.5 1e-13 >seq13065 Length=295510 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || || || || ||||||||||| | ||| |||||||||| || | |||||||| Sbjct 164016 TCTTCAAGTTGTTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTG 163957 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| ||||| ||| | || | |||||||| | | ||| ||||| | ||||| Sbjct 163956 TCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCTGATGGTTCAACCTCAAGTGTAATT 163897 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || || |||||||| |||||||| Sbjct 163896 GTCTTTCCAGTAAGTGTTTTCACGAAAATTTGCAT 163862 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||||| | ||| || | || || || || || || |||||||| || | Sbjct 164317 TCCTCCTCTCAAACGCAAGACTAAATGGAGGGTCGATTCTTTCTGAATGTTGTAGTCTGA 164258 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | || | || || || || || ||||||||||| | ||| |||||||||| || Sbjct 164257 CAAAGTACGGCCATCTTCAAGTTGTTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGG 164198 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | ||||| || ||| ||||| ||| | || | |||||||| | | ||| || Sbjct 164197 AATTCCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCTGATGGTTCAAC 164138 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||||| |||||||| || || || |||||||| |||||||| Sbjct 164137 CTCAAGTGTAATTGTCTTTCCAGTAAGTGTTTTCACGAAAATTTGCAT 164090 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || || ||||| ||||||||||| | ||| |||||||||| || | ||||| || Sbjct 163788 TCTTCAAGTTGCTTACCGGCAAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTG 163729 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || || || ||| | || | |||||||| | | ||| ||||||| || || Sbjct 163728 TCTTGGATTTTAGCCTTTACATTTTCAATGGTGTCTGAAGGTTCAACCTCCAAAGTGATG 163669 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| || ||||| ||||| ||||| Sbjct 163668 GTCTTTCCTGTGAGTGTTTTCACAAAGATCTGCAT 163634 >seq63207 Length=555540 Score = 91.5 bits (100), Expect = 1e-13 Identities = 175/254 (69%), Gaps = 7/254 (3%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || ||||| || | | || || ||||| || |||||| || ||||| Sbjct 379336 TATTTGCATACCTCCTCTAAGACGGAGTACAAGATGAAGTGTCGACTCCTTCTGAATGTT 379395 Query 44161 GTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 ||| || | ||| || || | || || || || || || || || ||||| | ||| Sbjct 379396 GTAGTCTGAGAG--GGTTCTTCCATCTTCAAGTTGTTTACCAGCGAAAATCAATCTTTGC 379453 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 ||||||| ||| | ||||| || || ||||| || | || | ||||| || Sbjct 379454 TGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATGGTATCA 379513 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | | ||||||||||| || || || || || || |||||||| || ||||| ||||| Sbjct 379514 GAAGGTTCCACCTCCAAAGTGATGGTTTTACCAGTAAGGGTCTTTACAAAGATCTGCATT 379573 Query 44339 ATGTGAATGAAAAT 44352 | |||| ||||| Sbjct 379574 GTCTGAA--AAAAT 379585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359702315657454